Protein-protein structure prediction by scoring molecular dynamics trajectories of putative poses

Author:

Sarti Edoardo1,Gladich Ivan1,Zamuner Stefano1,Correia Bruno E.2,Laio Alessandro1

Affiliation:

1. SISSA; via Bonomea 265 Trieste I-34136 Italy

2. Institute of Bioengineering, School of Engineering, École Polytechnique Fédérale De Lausanne; Lausanne Switzerland

Funder

Associazione Italiana per la Ricerca sul Cancro

Publisher

Wiley

Subject

Molecular Biology,Biochemistry,Structural Biology

Reference30 articles.

1. Molecular surface recognition: determination of geometric fit between proteins and their ligands by correlation techniques;Katchalski-Katzir;Proc Natl Acad Sci,1992

2. Protein docking using continuum electrostatics and geometric fit;Mandell;Protein Eng,2001

3. Geometrical docking algorithms. A practical approach;Wolfson;Methods in Molecular Biology,2000

4. Bigger: a new (soft) docking algorithm for predicting protein interactions;Palma;Proteins,2000

5. Protein docking using a genetic algorithm;Gardiner;Proteins,2001

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