Construction and Validation of a Prognostic Model Based on Novel Senescence‐Related Genes in Non‐Small Cell Lung Cancer Patients with Drug Sensitivity and Tumor Microenvironment

Author:

Liu Xiwen1ORCID,Lin Lixuan12,Cai Qi1,Sheng Hongxu1,Zeng Ruiqi13,Zhao Yi1,Qiu Xinyi14,Liu Huiting1,Huang Linchong1,Liang Wenhua15,He Jianxing16ORCID

Affiliation:

1. Department of Thoracic Surgery and Oncology, the First Affiliated Hospital of Guangzhou Medical University State Key Laboratory of Respiratory Disease & National Clinical Research Center for Respiratory Disease Guangzhou 510120 China

2. School of Clinical Medicine Henan University Kaifeng 475000 China

3. Nanshan School Guangzhou Medical University Jingxiu Road, Panyu District Guangzhou 511436 China

4. First Clinical School Guangzhou Medical University Jingxiu Road, Panyu District Guangzhou 511436 China

5. The First People's Hospital of Zhaoqing Zhaoqing 526000 China

6. Southern Medical University Guangzhou 510120 China

Abstract

AbstractCellular senescence contributes to cancer pathogenesis and immune regulation. Using the LASSO Cox regression, we developed a 12‐gene prognostic signature for lung adenocarcinoma (LUAD) from The Cancer Genome Atlas (TCGA) and a Gene Expression Omnibus (GEO) dataset. We assessed gene expression, drug sensitivity, immune infiltration, and conducted cell line experiments. High‐risk LUAD patients showed increased mortality risk and shorter survival (P < 0.001). Senescence‐related gene analysis indicated differences in protein phosphorylation and DNA methylation between normal individuals and LUAD patients. The high‐risk group showed a positive association with PD‐L1 expression (P = 0.003). Single‐cell sequencing data suggested PEBP1 might significantly impact T cell infiltration. We predicted potential sensitive compounds for 12 senescence genes and found GAPDH promoted cell line proliferation. We established a novel prognostic system based on a newly identified senescence gene. High‐risk patients had elevated immunosuppressive markers, and PEBP1 might influence T cell infiltration significantly. GAPDH, expressed at higher levels in tumors, could affect cancer progression. Our drug prediction model may guide treatment selection.

Publisher

Wiley

Subject

General Medicine

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