Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins-Reference-Cited by-同舟云学术

Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins

Published:2017-12-07 Issue:24 Volume:36 Page:3573-3599
ISSN:0261-4189
Container-title:The EMBO Journal
language:en
Short-container-title:EMBO J

Author:

Wutz Gordana¹,Várnai Csilla²^ORCID,Nagasaka Kota¹,Cisneros David A¹,Stocsits Roman R¹,Tang Wen¹,Schoenfelder Stefan²,Jessberger Gregor¹,Muhar Matthias¹,Hossain M Julius³^ORCID,Walther Nike³,Koch Birgit³,Kueblbeck Moritz³,Ellenberg Jan³,Zuber Johannes¹,Fraser Peter²⁴,Peters Jan‐Michael¹^ORCID

Affiliation:

1. Research Institute of Molecular Pathology (IMP) Vienna Biocenter (VBC) Vienna Austria

2. Nuclear Dynamics Programme The Babraham Institute Babraham Research Campus Cambridge UK

3. Cell Biology and Biophysics Unit European Molecular Biology Laboratory Heidelberg Germany

4. Department of Biological Science Florida State University Tallahassee FL USA

Funder

Boehringer Ingelheim

Österreichische Forschungsförderungsgesellschaft

Biotechnology and Biological Sciences Research Council

European Research Council

Austrian Science Fund

Human Frontier Science Program

Publisher

EMBO

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,Molecular Biology,General Neuroscience

Link

https://onlinelibrary.wiley.com/doi/pdf/10.15252/embj.201798004

Reference90 articles.

1. Self-organization of domain structures by DNA-loop-extruding enzymes

2. MULTOVL: fast multiple overlaps of genomic regions

3. Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

4. Physical and Functional Interactions among Basic Chromosome Organizational Features Govern Early Steps of Meiotic Chiasma Formation

5. Cohesin is positioned in mammalian genomes by transcription, CTCF and Wapl

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