Acetylation coordinates the crosstalk between carbon metabolism and ammonium assimilation in Salmonella enterica

Author:

Sun Yunwei1,Zhang Yuebin2ORCID,Zhao Tingting1,Luan Yi3,Wang Ying1,Yang Chen4,Shen Bo1ORCID,Huang Xi1,Li Guohui2ORCID,Zhao Shimin567ORCID,Zhao Guo‐ping45689ORCID,Wang Qijun13ORCID

Affiliation:

1. Department of Gastroenterology of Ruijin Hospital, Shanghai Institute of Immunology Shanghai Jiao Tong University School of Medicine Shanghai China

2. Laboratory of Molecular Modeling and Design, State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics Chinese Academy of Sciences Dalian China

3. Department of Pharmacology, Vascular Biology and Therapeutic Program Yale University School of Medicine New Haven CT USA

4. CAS‐Key Laboratory of Synthetic Biology, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences Chinese Academy of Sciences Shanghai China

5. State Key Lab of Genetic Engineering & Institutes of Biomedical Sciences Fudan University Shanghai China

6. Department of Microbiology and Microbial Engineering, School of Life Sciences Fudan University Shanghai China

7. Collaborative Innovation Center for Biotherapy, West China Hospital Sichuan University Chengdu China

8. Shanghai‐MOST Key Laboratory of Disease and Health Genomics Chinese National Human Genome Center at Shanghai Shanghai China

9. Department of Microbiology and Li KaShing Institute of Health Sciences The Chinese University of Hong Kong, Prince of Wales Hospital Shatin, New Territories, Hong Kong SAR China

Abstract

AbstractEnteric bacteria use up to 15% of their cellular energy for ammonium assimilation via glutamine synthetase (GS)/glutamate synthase (GOGAT) and glutamate dehydrogenase (GDH) in response to varying ammonium availability. However, the sensory mechanisms for effective and appropriate coordination between carbon metabolism and ammonium assimilation have not been fully elucidated. Here, we report that in Salmonella enterica, carbon metabolism coordinates the activities of GS/GDH via functionally reversible protein lysine acetylation. Glucose promotes Pat acetyltransferase‐mediated acetylation and activation of adenylylated GS. Simultaneously, glucose induces GDH acetylation to inactivate the enzyme by impeding its catalytic centre, which is reversed upon GDH deacetylation by deacetylase CobB. Molecular dynamics (MD) simulations indicate that adenylylation is required for acetylation‐dependent activation of GS. We show that acetylation and deacetylation occur within minutes of “glucose shock” to promptly adapt to ammonium/carbon variation and finely balance glutamine/glutamate synthesis. Finally, in a mouse infection model, reduced S. enterica growth caused by the expression of adenylylation‐mimetic GS is rescued by acetylation‐mimicking mutations. Thus, glucose‐driven acetylation integrates signals from ammonium assimilation and carbon metabolism to fine‐tune bacterial growth control.

Funder

National Natural Science Foundation of China

Publisher

Springer Science and Business Media LLC

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,Molecular Biology,General Neuroscience

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