Affiliation:
1. Scientific Direction, IRCCS Policlinico San Matteo Foundation, Pavia, Italy
2. IRCCS Istituto Giannina Gaslini, Scientific Direction, Italy
3. First Department of Internal Medicine, San Matteo Hospital Foundation, University of Pavia, Pavia, Italy
4. University of Pavia, Italy
Abstract
Behcet syndrome (BS) is a multisystemic perivasculitis whose genetic susceptibility is linked to HLA region. We first meta-analysed all HLA class I and II genes involved in BS susceptibility in all ethnic groups worldwide. We identified 1141 articles and finally included 31 case-control studies after multiple rounds of selection. We analysed frequencies for 24 HLA-A alleles (3 alleles for HLA-A
26 at four digits), 50 HLA-B alleles (11 alleles for HLA-B
51 at four digits), 15 HLA-C alleles, 16 HLA-DRB1 alleles, 6 HLA-DQB1 alleles, and 15 HLA-DPB1 alleles. We meta-analysed only HLA allelic frequencies from at least three studies; therefore, we investigated 21 alleles out of 140. Going from 7.00 to 1.6 OR, we found 11 class I alleles conferring risk for BS:
,
,
,
,
,
,
,
,
,
, and
. Overall, the studies included populations from Europe (Greece, Spain, Italy, Germany, and Ireland), Asia (Korea, China, China Han, and Thailand), Middle East (Israel, Saudi Arabia, and Iran), and Morocco (as no other North-African population was included). We collected a number of ethnical groups sufficient to conduct an ethnic-specific meta-analysis where Europeans showed 11.25 OR for B
51:08 and Japan 3.50 OR for
. A remarkable result was that the most frequent
two-digit alleles associated with BS were different among populations:
in Europe,
in Turkey, and
in Japan. Overall, we discussed our real-world results with other imputation studies.
Subject
Biochemistry (medical),Clinical Biochemistry,Genetics,Molecular Biology,General Medicine