Investigating the Lung Adenocarcinoma Stem Cell Biomarker Expressions Using Machine Learning Approaches

Author:

Bhuvaneswari M. S.1,Priyadharsini S.1,Balaganesh N.1,Theenathayalan R.2,Hailu Tegegne Ayalew3ORCID

Affiliation:

1. Department of Computer Science and Engineering, Mepco Schlenk Engineering College, Sivakasi, Tamil Nadu 626005, India

2. Department of Civil Engineering, Mepco Schlenk Engineering College, Sivakasi, Tamil Nadu 626005, India

3. Department of Electrical and Computer Engineering, Kombolcha Institute of Technology, Wollo University, Ethiopia

Abstract

The objective of the study is to look at the activation of stem cell-related markers in lung adenocarcinoma. Utilizing an unsupervised machine learning approach centered on the mRNA expression of pluripotent stem cells as well as its subsequent developed progeny, the mRNA stemness index of further around 500 LUAD patients from The Cancer Genome Atlas dataset was generated. In LUADs, mRNAsi had first been investigated using differential variations, survivability analyses, medical phases, and sexuality. A computational approach is used for identifying cell clusters utilizing fuzzy clustering. There at transcriptional as well as protein stages, the interactions between the genetic markers were investigated. The functionality and processes of the important genes were annotated using expression values. The degree of gene expression related to the clinical symptoms and the likelihood of surviving have also been confirmed. In cancer patients, the mRNAsi genes were highly elevated. In particular, the mRNAsi score rises with advanced trials and varies markedly by sexuality. Within several years, reduced mRNAsi categories will have superior overall survivability in large LUADs. Individuals with chronic LUAD had greater mRNAsi and had reduced average survivability. The important genes and the distinguished categories have been chosen based on their mRNAsi connections. Some of the major genes related to cell proliferating Gene Ontology concepts were found enriched out from the cell cycle Kyoto Encyclopedia of Genes and Genomes (KEGG) process. Specific genes were found to be linked to CSC features. Their activation grew in lockstep with the progression of LUAD’s pathology, so these markers appeared amplified in pan-cancers. These important markers were discovered to have substantial connections as a group, suggesting that they could be exploited as drug applications in the therapy of LUAD by suppressing stemness traits.

Publisher

Hindawi Limited

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine

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