Multi-Layer Perceptron Classifier with the Proposed Combined Feature Vector of 3D CNN Features and Lung Radiomics Features for COPD Stage Classification

Author:

Yang Yingjian12ORCID,Zeng Nanrong23,Chen Ziran12,Li Wei2,Guo Yingwei12,Wang Shicong23,Duan Wenxin23,Liu Yang23,Chen Rongchang456ORCID,Kang Yan1237ORCID

Affiliation:

1. College of Medicine and Biological Information Engineering, Northeastern University, Shenyang 110169, China

2. College of Health Science and Environmental Engineering, Shenzhen Technology University, Shenzhen 518118, China

3. School of Applied Technology, Shenzhen University, Shenzhen 518060, China

4. Shenzhen Institute of Respiratory Diseases, Shenzhen People’s Hospital, Shenzhen 518001, China

5. The Second Clinical Medical College, Jinan University 518001, Guangzhou, China

6. The First Affiliated Hospital, Southern University of Science and Technology 518001, Shenzhen, China

7. Engineering Research Centre of Medical Imaging and Intelligent Analysis, Ministry of Education, Shenyang 110169, China

Abstract

Computed tomography (CT) has been regarded as the most effective modality for characterizing and quantifying chronic obstructive pulmonary disease (COPD). Therefore, chest CT images should provide more information for COPD diagnosis, such as COPD stage classification. This paper proposes a features combination strategy by concatenating three-dimension (3D) CNN features and lung radiomics features for COPD stage classification based on the multi-layer perceptron (MLP) classifier. First, 465 sets of chest HRCT images are automatically segmented by a trained ResU-Net, obtaining the lung images with the Hounsfield unit. Second, the 3D CNN features are extracted from the lung region images based on a truncated transfer learning strategy. Then, the lung radiomics features are extracted from the lung region images by PyRadiomics. Third, the MLP classifier with the best classification performance is determined by the 3D CNN features and the lung radiomics features. Finally, the proposed combined feature vector is used to improve the MLP classifier’s performance. The results show that compared with CNN models and other ML classifiers, the MLP classifier with the best classification performance is determined. The MLP classifier with the proposed combined feature vector has achieved accuracy, mean precision, mean recall, mean F1-score, and AUC of 0.879, 0.879, 0.879, 0.875, and 0.971, respectively. Compared to the MLP classifier with the 3D CNN features selected by Lasso, our method based on the MLP classifier has improved the classification performance by 5.8% (accuracy), 5.3% (mean precision), 5.8% (mean recall), 5.4% (mean F1-score), and 2.5% (AUC). Compared to the MLP classifier with lung radiomics features selected by Lasso, our method based on the MLP classifier has improved the classification performance by 5.0% (accuracy), 5.1% (mean precision), 5.0% (mean recall), 5.1% (mean F1-score), and 2.1% (AUC). Therefore, it is concluded that our method is effective in improving the classification performance for COPD stage classification.

Funder

National Natural Science Foundation of China

Publisher

Hindawi Limited

Subject

Health Informatics,Biomedical Engineering,Surgery,Biotechnology

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