Automatic COVID-19 Lung Infection Segmentation through Modified Unet Model

Author:

Shamim Sania1ORCID,Awan Mazhar Javed1ORCID,Mohd Zain Azlan2ORCID,Naseem Usman3ORCID,Mohammed Mazin Abed4ORCID,Garcia-Zapirain Begonya5ORCID

Affiliation:

1. Department of Software Engineering, University of Management and Technology, Lahore, Pakistan

2. School of Computing, UTM Big Data Centre, Universiti Teknologi Malaysia, Skudai 81310, Johor, Malaysia

3. School of Computer Science, The University of Sydney, Sydney, Australia

4. College of Computer Science and Information Technology, University of Anbar, 11, Ramadi 31001, Iraq

5. eVIDA Laboratory, University of Deusto, Avda/Universidades 24, 48007, Bilbao, Spain

Abstract

The coronavirus (COVID-19) pandemic has had a terrible impact on human lives globally, with far-reaching consequences for the health and well-being of many people around the world. Statistically, 305.9 million people worldwide tested positive for COVID-19, and 5.48 million people died due to COVID-19 up to 10 January 2022. CT scans can be used as an alternative to time-consuming RT-PCR testing for COVID-19. This research work proposes a segmentation approach to identifying ground glass opacity or ROI in CT images developed by coronavirus, with a modified structure of the Unet model having been used to classify the region of interest at the pixel level. The problem with segmentation is that the GGO often appears indistinguishable from a healthy lung in the initial stages of COVID-19, and so, to cope with this, the increased set of weights in contracting and expanding the Unet path and an improved convolutional module is added in order to establish the connection between the encoder and decoder pipeline. This has a major capacity to segment the GGO in the case of COVID-19, with the proposed model being referred to as “convUnet.” The experiment was performed on the Medseg1 dataset, and the addition of a set of weights at each layer of the model and modification in the connected module in Unet led to an improvement in overall segmentation results. The quantitative results obtained using accuracy, recall, precision, dice-coefficient, F1score, and IOU were 93.29%, 93.01%, 93.67%, 92.46%, 93.34%, 86.96%, respectively, which is better than that obtained using Unet and other state-of-the-art models. Therefore, this segmentation approach proved to be more accurate, fast, and reliable in helping doctors to diagnose COVID-19 quickly and efficiently.

Funder

Basque Government

Publisher

Hindawi Limited

Subject

Health Informatics,Biomedical Engineering,Surgery,Biotechnology

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