Feature Selection Method Based on Partial Least Squares and Analysis of Traditional Chinese Medicine Data

Author:

Huang Canyi1ORCID,Du Jianqiang1ORCID,Nie Bin1,Yu Riyue2,Xiong Wangping1,Zeng Qingxia1

Affiliation:

1. Computer School, Jiangxi University of Traditional Chinese Medicine, Nanchang 330004, China

2. College of Pharmacy, Jiangxi University of Traditional Chinese Medicine, Nanchang 330004, China

Abstract

The partial least squares method has many advantages in multivariable linear regression, but it does not include the function of feature selection. This method cannot screen for the best feature subset (referred to in this study as the “Gold Standard”) or optimize the model, although contrarily using the L1 norm can achieve the sparse representation of parameters, leading to feature selection. In this study, a feature selection method based on partial least squares is proposed. In the new method, exploiting partial least squares allows extraction of the latent variables required for performing multivariable linear regression, and this method applies the L1 regular term constraint to the sum of the absolute values of the regression coefficients. This technique is then combined with the coordinate descent method to perform multiple iterations to select a better feature subset. Analyzing traditional Chinese medicine data and University of California, Irvine (UCI), datasets with the model, the experimental results show that the feature selection method based on partial least squares exhibits preferable adaptability for traditional Chinese medicine data and UCI datasets.

Funder

National Natural Science Foundation of China

Publisher

Hindawi Limited

Subject

Applied Mathematics,General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,Modelling and Simulation,General Medicine

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