A Prediction Model for Membrane Proteins Using Moments Based Features

Author:

Butt Ahmad Hassan1,Khan Sher Afzal2,Jamil Hamza1,Rasool Nouman3,Khan Yaser Daanial1

Affiliation:

1. Department of Computer Science, School of Systems and Technology, University of Management and Technology, P.O. Box 10033, C-II, Johar Town, Lahore 54770, Pakistan

2. Faculty of Computing and Information Technology in Rabigh, King Abdul Aziz University, Saudi Arabia

3. Department of Chemistry, School of Science, University of Management and Technology, P.O. Box 10033, C-II, Johar Town, Lahore 54770, Pakistan

Abstract

The most expedient unit of the human body is its cell. Encapsulated within the cell are many infinitesimal entities and molecules which are protected by a cell membrane. The proteins that are associated with this lipid based bilayer cell membrane are known as membrane proteins and are considered to play a significant role. These membrane proteins exhibit their effect in cellular activities inside and outside of the cell. According to the scientists in pharmaceutical organizations, these membrane proteins perform key task in drug interactions. In this study, a technique is presented that is based on various computationally intelligent methods used for the prediction of membrane protein without the experimental use of mass spectrometry. Statistical moments were used to extract features and furthermore a Multilayer Neural Network was trained using backpropagation for the prediction of membrane proteins. Results show that the proposed technique performs better than existing methodologies.

Publisher

Hindawi Limited

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine

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