Development of a Novel Tool for the Retrieval and Analysis of Hormone Receptor Expression Characteristics in Metastatic Breast Cancer via Data Mining on Pathology Reports

Author:

Chang Kai-Po12ORCID,Wang John2,Chang Chi-Chang34ORCID,Chu Yen-Wei56789ORCID

Affiliation:

1. Ph.D. Program in Medical Biotechnology, National Chung Hsing University, Taichung 402, Taiwan

2. Department of Pathology, China Medical University Hospital, Taichung 404, Taiwan

3. School of Medical Informatics, Chung-Shan Medical University, Taichung 402, Taiwan

4. IT Office, Chung-Shan Medical University Hospital, Taichung 402, Taiwan

5. Institute of Genomics and Bioinformatics, National Chung Hsing University, 145 Xingda Rd., South Dist., Taichung City 402, Taiwan

6. Institute of Molecular Biology, National Chung Hsing University, 145 Xingda Rd., South Dist., Taichung City 402, Taiwan

7. Agricultural Biotechnology Center, National Chung Hsing University, 145 Xingda Rd., South Dist., Taichung City 402, Taiwan

8. Biotechnology Center, National Chung Hsing University, 145 Xingda Rd., South Dist., Taichung City 402, Taiwan

9. Ph.D. Program in Translational Medicine, National Chung Hsing University, 145 Xingda Rd., South Dist., Taichung City 402, Taiwan

Abstract

Information about the expression status of hormone receptors such as estrogen receptor (ER), progesterone receptor (PR), and Her-2 is crucial in the management and prognosis of breast cancer. Therefore, the retrieval and analysis of hormone receptor expression characteristics in metastatic breast cancer may be valuable in breast cancer study. Herein, we report a text mining tool based on word/phrase matching that retrieves hormone receptor expression data of regional or distant metastatic breast cancer from pathology reports. It was tested on pathology reports at the China Medical University Hospital from 2013 to 2018. The tool showed specificities of 91.6% and 63.3% for the detection of regional lymph node metastasis and distant metastasis, respectively. Sensitivity in immunohistochemical study result extraction in these cases was 98.6% for distant metastasis and 78.3% for regional lymph node metastasis. Statistical analysis on these retrieved data showed significant difference s in PR and Her-2 expressions between regional and metastatic breast cancer, which is compatible with previous studies. In conclusion, our study shows that metastatic breast cancer hormone receptor expression characteristics can be retrieved by text mining. The algorithm designed in this study may be useful in future studies about text mining in pathology reports.

Funder

China Medical University Hospital

Publisher

Hindawi Limited

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine

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