Host lipidome and tuberculosis treatment failure

Author:

Shivakoti RupakORCID,Newman John W.,Hanna Luke Elizabeth,Queiroz Artur T.L.,Borkowski Kamil,Gupte Akshay N.,Paradkar Mandar,Satyamurthi Pattabiraman,Kulkarni Vandana,Selva Murugesh,Pradhan Neeta,Shivakumar Shri Vijay Bala Yogendra,Natarajan Saravanan,Karunaianantham Ramesh,Gupte Nikhil,Thiruvengadam Kannan,Fiehn Oliver,Bharadwaj Renu,Kagal Anju,Gaikwad SanjayORCID,Sangle Shashikala,Golub Jonathan E.ORCID,Andrade Bruno B.ORCID,Mave Vidya,Gupta Amita,Padmapriyadarsini Chandrasekaran

Abstract

IntroductionHost lipids play important roles in tuberculosis (TB) pathogenesis. Whether host lipids at TB treatment initiation (baseline) affect subsequent treatment outcomes has not been well characterised. We used unbiased lipidomics to study the prospective association of host lipids with TB treatment failure.MethodsA case–control study (n=192), nested within a prospective cohort study, was used to investigate the association of baseline plasma lipids with TB treatment failure among adults with pulmonary TB. Cases (n=46) were defined as TB treatment failure, while controls (n=146) were those without failure. Complex lipids and inflammatory lipid mediators were measured using liquid chromatography mass spectrometry techniques. Adjusted least-square regression was used to assess differences in groups. In addition, machine learning identified lipids with highest area under the curve (AUC) to classify cases and controls.ResultsBaseline levels of 32 lipids differed between controls and those with treatment failure after false discovery rate adjustment. Treatment failure was associated with lower baseline levels of cholesteryl esters and oxylipin, and higher baseline levels of ceramides and triglycerides compared to controls. Two cholesteryl ester lipids combined in a unique classifier model provided an AUC of 0.79 (95% CI 0.65–0.93) in the test dataset for prediction of TB treatment failure.ConclusionsWe identified lipids, some with known roles in TB pathogenesis, associated with TB treatment failure. In addition, a lipid signature with prognostic accuracy for TB treatment failure was identified. These lipids could be potential targets for risk-stratification, adjunct therapy and treatment monitoring.

Funder

Department of Biotechnology, Ministry of Science and Technology, India

National Institute of Child Health and Human Development

National Institute of Allergy and Infectious Diseases

U.S. Department of Agriculture

CRDF Global

Fogarty International Center

Indian Council of Medical Research

Publisher

European Respiratory Society (ERS)

Subject

Pulmonary and Respiratory Medicine

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