Protein-Peptide Docking: An Initiation to Discover Therapeutic Peptides

Author:

Rashmi B. Aarthi1,Anandaram Harishchander2,Kumar S. Sachin2

Affiliation:

1. Department of Bioinformatics, Sri Krishna Arts and Science College, Coimbatore, Tamil Nadu, India

2. Centre for Excellence in Computational Engineering and Networking, Amrita Vishwa Vidyapeetham, Coimbatore, Tamil Nadu, India

Abstract

The in-silico study on protein-peptide docking involves initiating the biomolecular interaction to identify compatible peptides with antibacterial properties. The current research elucidates a computational module for the discovery. The proteinpeptide docking of marine peptides against the marine bacteria and the gills of teleost fish in CABS-DOCK resulted in a compatible docked structure with the highest accuracy. Protein-peptide docking resulted in maximum compatibility for “ELLVDLL” derived from marine bacteria than “FIHHIIGGLFSVGKHIHGLIHGH” derived from the tapaila gills of teleost fish concerning receptors of resistant bacterial strains.

Publisher

BENTHAM SCIENCE PUBLISHERS

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