Noncoding RNA Databases

Author:

Allmer Jens1ORCID

Affiliation:

1. Medical Informatics and Bioinformatics, Hochschule Ruhr West, University of Applied Sciences, Mülheim an der Ruhr, Germany

Abstract

Abstract: Diseases such as cancer are often defined by dysregulation of gene expression. Noncoding RNAs (ncRNA) such as microRNAs are involved in gene expression and cell-cell communication. Many other ncRNAs exist, such as circular RNAs and small nucleolar RNAs. A wealth of knowledge is available for many ncRNAs, but the information is federated in many databases. A small number of highly complementary ncRNA databases are discussed in this work. Their relevance for cancer research is highlighted, and some of the current problems and limitations are revealed. A central or shared database enforcing community reporting and quality standards is needed in the future. • RNA-seq • Noncoding RNAs • Databases • Data repositories

Publisher

Bentham Science Publishers Ltd.

Subject

Pharmaceutical Science,Biotechnology

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