Incorporating antigen processing into CD4+ T cell epitope prediction with integer linear programming

Author:

Bhattacharya Avik1,Lyons Molly C.1,Landry Samuel J.1,Mettu Ramgopal R.1

Affiliation:

1. Tulane University

Publisher

ACM

Reference44 articles.

1. E Adams , W Britton , A Morgan , S Sergeantson , and A Basten . 1994. Individuals from Different Populations Identify Multiple and Diverse T-Cell Determinants on Mycobacterial HSP70. Scandinavian journal of immunology 39, 6 ( 1994 ), 588--596. E Adams, W Britton, A Morgan, S Sergeantson, and A Basten. 1994. Individuals from Different Populations Identify Multiple and Diverse T-Cell Determinants on Mycobacterial HSP70. Scandinavian journal of immunology 39, 6 (1994), 588--596.

2. Protein-based virtual screening of chemical databases. II. Are homology models of g-protein coupled receptors suitable targets?

3. Characterization of the human T cell response to antigen 5 from Vespula vulgaris (Ves v 5)

4. Characterization of T-helper epitopes of the glycoprotein of vesicular stomatitis virus

5. Tysheena Charles , Daniel L Moss , Pawan Bhat , Peyton W Moore , Nicholas A Kummer , Avik Bhattacharya , Ramgopal R Mettu , and Samuel J Landry . 2020. CD4+ T-cell epitope prediction by combined analysis of antigen conformational flexibility and peptide- MHCII binding affinity. bioRxiv ( 2020 ). Tysheena Charles, Daniel L Moss, Pawan Bhat, Peyton W Moore, Nicholas A Kummer, Avik Bhattacharya, Ramgopal R Mettu, and Samuel J Landry. 2020. CD4+ T-cell epitope prediction by combined analysis of antigen conformational flexibility and peptide-MHCII binding affinity. bioRxiv (2020).

Cited by 1 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Parallel Computation of Conformational Stability for CD4+ T-cell Epitope Prediction;2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM);2023-12-05

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