Making Sense of Sleep

Author:

Zhai Bing1,Perez-Pozuelo Ignacio2,Clifton Emma A. D.3,Palotti Joao4,Guan Yu1

Affiliation:

1. Newcastle University, Open Lab, Urban Sciences Building, Newcastle upon Tyne, UK

2. University of Cambridge & The Alan Turing Institute, Department of Medicine, Cambridge, UK

3. University of Cambridge, Department of Medicine, Cambridge, UK

4. Massachusetts Institute of Technology, CSAIL, Cambridge, USA

Abstract

Traditionally, sleep monitoring has been performed in hospital or clinic environments, requiring complex and expensive equipment set-up and expert scoring. Wearable devices increasingly provide a viable alternative for sleep monitoring and are able to collect movement and heart rate (HR) data. In this work, we present a set of algorithms for sleep-wake and sleep-stage classification based upon actigraphy and cardiac sensing amongst 1,743 participants. We devise movement and cardiac features that could be extracted from research-grade wearable sensors and derive models and evaluate their performance in the largest open-access dataset for human sleep science. Our results demonstrated that neural network models outperform traditional machine learning methods and heuristic models for both sleep-wake and sleep-stage classification. Convolutional neural networks (CNNs) and long-short term memory (LSTM) networks were the best performers for sleep-wake and sleep-stage classification, respectively. Using SHAP (SHapley Additive exPlanation) with Random Forest we identified that frequency features from cardiac sensors are critical to sleep-stage classification. Finally, we introduced an ensemble-based approach to sleep-stage classification, which outperformed all other baselines, achieving an accuracy of 78.2% and F1 score of 69.8% on the classification task for three sleep stages. Together, this work represents the first systematic multimodal evaluation of sleep-wake and sleep-stage classification in a large, diverse population. Alongside the presentation of an accurate sleep-stage classification approach, the results highlight multimodal wearable sensing approaches as scalable methods for accurate sleep-classification, providing guidance on optimal algorithm deployment for automated sleep assessment. The code used in this study can be found online at: https://github.com/bzhai/multimodal_sleep_stage_benchmark.git

Funder

Innovative Medicines Initiative

Engineering and Physical Sciences Research Council

Publisher

Association for Computing Machinery (ACM)

Subject

Computer Networks and Communications,Hardware and Architecture,Human-Computer Interaction

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1. Using machine learning to identify patient characteristics to predict mortality of in-patients with COVID-19 in South Florida;Frontiers in Digital Health;2023-07-28

2. ConvBoost;Proceedings of the ACM on Interactive, Mobile, Wearable and Ubiquitous Technologies;2023-06-12

3. SleepECG: a Python package for sleep staging based on heart rate;Journal of Open Source Software;2023-06-09

4. Temporal Neighborhood based Self-supervised Pre-training Model for Sleep Stages Classification;Proceedings of the 2023 15th International Conference on Bioinformatics and Biomedical Technology;2023-05-26

5. Generalisability of sleep stage classification based on interbeat intervals: validating three machine learning approaches on self-recorded test data;Behaviormetrika;2023-05-18

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