Combining Task-based Parallelism and Adaptive Mesh Refinement Techniques in Molecular Dynamics Simulations

Author:

Prat Raphaël1,Colombet Laurent1,Namyst Raymond2

Affiliation:

1. Commissariat à l'Energie Atomique, Arpajon, France

2. University of Bordeaux, Inria, Talence, France

Publisher

ACM

Reference36 articles.

1. M.P. Allen and D.J. Tildesley. 1987. Computer Simulation of Liquids. Clarendon Press. M.P. Allen and D.J. Tildesley. 1987. Computer Simulation of Liquids. Clarendon Press.

2. GROMACS: A message-passing parallel molecular dynamics implementation

3. M. Berger and P. Colella. 1989. Local adaptive mesh refinement for shock hydrodynamics. J. Comput. Phys. (1989). M. Berger and P. Colella. 1989. Local adaptive mesh refinement for shock hydrodynamics. J. Comput. Phys. (1989).

4. M. Berger and J. Oliger. 1984. Adaptive mesh refinement for hyperbolic partial differential equations. J. Comput. Phys. 53 (1984). M. Berger and J. Oliger. 1984. Adaptive mesh refinement for hyperbolic partial differential equations. J. Comput. Phys. 53 (1984).

5. A Partitioning Strategy for Nonuniform Problems on Multiprocessors

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