Jointly Modeling Label and Feature Heterogeneity in Medical Informatics

Author:

Yang Pei1,Yang Hongxia2,Fu Haoda3,Zhou Dawei1,Ye Jieping4,Lappas Theodoros5,He Jingrui1

Affiliation:

1. Arizona State University, Tempe, AZ

2. Yahoo! Inc., Sunnyvale, CA

3. Eli Lilly and Company, Indianapolis, IN

4. University of Michigan, Ann Arbor, MI

5. Stevens Institute of Technology, Hoboken, NJ

Abstract

Multiple types of heterogeneity including label heterogeneity and feature heterogeneity often co-exist in many real-world data mining applications, such as diabetes treatment classification, gene functionality prediction, and brain image analysis. To effectively leverage such heterogeneity, in this article, we propose a novel graph-based model for Learning with both Label and Feature heterogeneity, namely L 2 F . It models the label correlation by requiring that any two label-specific classifiers behave similarly on the same views if the associated labels are similar, and imposes the view consistency by requiring that view-based classifiers generate similar predictions on the same examples. The objective function for L 2 F is jointly convex. To solve the optimization problem, we propose an iterative algorithm, which is guaranteed to converge to the global optimum. One appealing feature of L 2 F is that it is capable of handling data with missing views and labels. Furthermore, we analyze its generalization performance based on Rademacher complexity, which sheds light on the benefits of jointly modeling the label and feature heterogeneity. Experimental results on various biomedical datasets show the effectiveness of the proposed approach.

Funder

National Science Foundation

U.S. Army Research Laboratory

Defense Advanced Research Projects Agency

National Natural Science Foundation of China

Publisher

Association for Computing Machinery (ACM)

Subject

General Computer Science

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