KmerEstimate-Reference-Cited by-同舟云学术

KmerEstimate

Published:2018-08-15 Issue: Volume: Page:
ISSN:
Container-title:Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics
language:
Short-container-title:

Author:

Behera Sairam¹,Gayen Sutanu¹,Deogun Jitender S.¹,Vinodchandran N. V.¹

Affiliation:

1. University Of Nebraska-Lincoln, Lincoln, NE, USA

Publisher

ACM

Link

https://dl.acm.org/doi/pdf/10.1145/3233547.3233587

Reference46 articles.

1. Isaac Akogwu Nan Wang Chaoyang Zhang and Ping Gong. 2016. A comparative study of k-spectrum-based error correction methods for next-generation sequencing data analysis. In Human Genomics. Isaac Akogwu Nan Wang Chaoyang Zhang and Ping Gong. 2016. A comparative study of k-spectrum-based error correction methods for next-generation sequencing data analysis. In Human Genomics.

2. KAnalyze: a fast versatile pipelined K-mer toolkit

3. A. B. Carvalho E. G. Dupim and G. Goldstein. 2016. Improved assembly of noisy long reads by k-mer validation. Genome research 26 12 (2016) 1710--1720. A. B. Carvalho E. G. Dupim and G. Goldstein. 2016. Improved assembly of noisy long reads by k-mer validation. Genome research 26 12 (2016) 1710--1720.

4. Soyeon Cha and David McK. Bird. 2016. Optimizing k-mer size using a variant grid search to enhance de novo genome assembly. In Bioinformation. Soyeon Cha and David McK. Bird. 2016. Optimizing k-mer size using a variant grid search to enhance de novo genome assembly. In Bioinformation.

Cited by 7 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. SeQual-Stream: approaching stream processing to quality control of NGS datasets;BMC Bioinformatics;2023-10-27

2. Count-Min Sketch with Variable Number of Hash Functions: An Experimental Study;String Processing and Information Retrieval;2023

3. Phase Transition in Count Approximation by Count-Min Sketch with Conservative Updates;Lecture Notes in Computer Science;2023

4. Novel Applications of Ant Colony Optimization with the Traveling Salesman Problem in DNA Sequence Optimization;2022 IEEE 2nd International Symposium on Sustainable Energy, Signal Processing and Cyber Security (iSSSC);2022-12-15

5. TahcoRoll: fast genomic signature profiling via thinned automaton and rolling hash;Medical Review;2021-12-01