Detecting Chromosomal Inversions from Dense SNPs by Combining PCA and Association Tests
Author:
Affiliation:
1. Marquette University, Milwaukee, WI, USA
2. University of Tennessee, Knoxville, TN, USA
Publisher
ACM
Link
https://dl.acm.org/doi/pdf/10.1145/3233547.3233571
Reference36 articles.
1. Following the footprints of polymorphic inversions on SNP data: from detection to association tests
2. Alejandro Cáceres Suzanne S Sindi Benjamin J Raphael Mario Cáceres and Juan R González. 2012. Identification of polymorphic inversions from genotypes. BMC Bioinformatics 13 (Feb. 2012) 28. Alejandro Cáceres Suzanne S Sindi Benjamin J Raphael Mario Cáceres and Juan R González. 2012. Identification of polymorphic inversions from genotypes. BMC Bioinformatics 13 (Feb. 2012) 28.
3. Loading and correlations in the interpretation of principle compenents
4. BreakDancer: an algorithm for high-resolution mapping of genomic structural variation
5. Sequence-Based Detection and Breakpoint Assembly of Polymorphic Inversions
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1. Segmenting and Genotyping Large, Polymorphic Inversions;2023 IEEE International Conference on Electro Information Technology (eIT);2023-05-18
2. Fast, low-memory detection and localization of large, polymorphic inversions from SNPs;PeerJ;2022-01-20
3. Detecting inversions with PCA in the presence of population structure;PLOS ONE;2020-10-29
4. Detecting Inversions with PCA in the Presence of Population Structure;2019-08-15
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