BiLSTM with novel feature matrix predicts the binding affinity between MHC-I and peptides

Author:

Wei Zihan1ORCID,Dai Zongrui2ORCID

Affiliation:

1. Southwest University, China

2. University of Michigan, Ann Arbor, USA

Publisher

ACM

Reference20 articles.

1. Sullivan RJ , Atkins MB , Kirkwood JM , Agarwala SS , Clark JI , Ernstoff MS , Fecher L , Gajewski TF , Gastman B , Lawson DH , Lutzky J , McDermott DF , Margolin KA , Mehnert JM , Pavlick AC , Richards JM , Rubin KM , Sharfman W , Silverstein S , Slingluff CL Jr, Sondak VK , Tarhini AA , Thompson JA , Urba WJ , White RL , Whitman ED , Hodi FS , Kaufman HL. An update on the Society for Immunotherapy of Cancer consensus statement on tumor immunotherapy for the treatment of cutaneous melanoma: version 2.0. J Immunother Cancer. 2018 May 30;6(1):44. doi: 10.1186/s40425-018-0362-6 10.1186/s40425-018-0362-6 Sullivan RJ, Atkins MB, Kirkwood JM, Agarwala SS, Clark JI, Ernstoff MS, Fecher L, Gajewski TF, Gastman B, Lawson DH, Lutzky J, McDermott DF, Margolin KA, Mehnert JM, Pavlick AC, Richards JM, Rubin KM, Sharfman W, Silverstein S, Slingluff CL Jr, Sondak VK, Tarhini AA, Thompson JA, Urba WJ, White RL, Whitman ED, Hodi FS, Kaufman HL. An update on the Society for Immunotherapy of Cancer consensus statement on tumor immunotherapy for the treatment of cutaneous melanoma: version 2.0. J Immunother Cancer. 2018 May 30;6(1):44. doi: 10.1186/s40425-018-0362-6

2. Morrison AH , Byrne KT , Vonderheide RH. Immunotherapy and Prevention of Pancreatic Cancer. Trends Cancer. 2018 Jun;4(6): 418 - 428 . doi: 10.1016/j.trecan.2018.04.001 10.1016/j.trecan.2018.04.001 Morrison AH, Byrne KT, Vonderheide RH. Immunotherapy and Prevention of Pancreatic Cancer. Trends Cancer. 2018 Jun;4(6):418-428. doi: 10.1016/j.trecan.2018.04.001

3. Yoon JS Song BG Lee JH Lee HY Kim SW Chang Y Lee YB Cho EJ Yu SJ Sinn DH Kim YJ Lee JH Yoon JH. Adjuvant cytokine-induced killer cell immunotherapy for hepatocellular carcinoma: a propensity score-matched analysis of real-world data. BMC Cancer. 2019 May 31;19(1):523. doi: 10.1186/s12885-019-5740-z 10.1186/s12885-019-5740-z

4. Yoon JS Song BG Lee JH Lee HY Kim SW Chang Y Lee YB Cho EJ Yu SJ Sinn DH Kim YJ Lee JH Yoon JH. Adjuvant cytokine-induced killer cell immunotherapy for hepatocellular carcinoma: a propensity score-matched analysis of real-world data. BMC Cancer. 2019 May 31;19(1):523. doi: 10.1186/s12885-019-5740-z

5. Vonderheide RH , Bayne LJ. Inflammatory networks and immune surveillance of pancreatic carcinoma. Curr Opin Immunol. 2013 Apr;25(2): 200 - 205 . doi: 10.1016/j.coi.2013.01.006 10.1016/j.coi.2013.01.006 Vonderheide RH, Bayne LJ. Inflammatory networks and immune surveillance of pancreatic carcinoma. Curr Opin Immunol. 2013 Apr;25(2):200-5. doi: 10.1016/j.coi.2013.01.006

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