Breast Cancer Subtype by Imbalanced Omics Data through A Deep Learning Fusion Model

Author:

Zeng Jingwen1,Cai Hongmin1,Akutsu Tatsuya2

Affiliation:

1. School of Computer Science and Engineering, South China University of Technology, Guangzhou, China

2. Bioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, Kyoto, Japan

Funder

Science and Technology Planning Project of Guangdong Province

National Natural Science Foundation of China

the Health & Medical Collaborative Innovation Project of Guangzhou City

Publisher

ACM

Reference43 articles.

1. Cancer Genome Atlas Network. 2012. Comprehensive molecular portraits of human breast tumours. Nature 490(7418) (September 2012) 61--70. DOI= https://doi.org/10.1038/nature11412. Cancer Genome Atlas Network. 2012. Comprehensive molecular portraits of human breast tumours. Nature 490(7418) (September 2012) 61--70. DOI= https://doi.org/10.1038/nature11412.

2. Supervised Risk Predictor of Breast Cancer Based on Intrinsic Subtypes

3. Cai J. Cai H. Chen J. & Yang X. 2018. Identifying "Many-to-Many" Relationships Between Gene-Expression Data and Drug-Response Data Via Sparse Binary Matching. IEEE/ACM transactions on computational biology and bioinformatics. (June 2018). DOI= 10.1109/TCBB.2018.2849708. Cai J. Cai H. Chen J. & Yang X. 2018. Identifying "Many-to-Many" Relationships Between Gene-Expression Data and Drug-Response Data Via Sparse Binary Matching. IEEE/ACM transactions on computational biology and bioinformatics. (June 2018). DOI= 10.1109/TCBB.2018.2849708.

4. Xu A. Chen J. Peng H. Han G. & Cai H. 2019. Simultaneous interrogation of cancer omics to identify subtypes with significant clinical differences. Frontiers in genetics 10 (March 2019) 236. DOI= https://doi.org/10.3389/fgene.2019.00236. Xu A. Chen J. Peng H. Han G. & Cai H. 2019. Simultaneous interrogation of cancer omics to identify subtypes with significant clinical differences. Frontiers in genetics 10 (March 2019) 236. DOI= https://doi.org/10.3389/fgene.2019.00236.

5. Bhattacharyya M. Nath J. & Bandyopadhyay S. 2015. MicroRNA signatures highlight new breast cancer subtypes. Gene 556

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