A Containerization Framework for Bioinformatics Software to Advance Scalability, Portability, and Maintainability-Reference-Cited by-同舟云学术

A Containerization Framework for Bioinformatics Software to Advance Scalability, Portability, and Maintainability

Published:2023-09-03 Issue: Volume: Page:
ISSN:
Container-title:Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics
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Author:

Tam Justin Z¹^ORCID,Chua Alexandra¹^ORCID,Gallagher Adyn¹^ORCID,Omene Denice¹^ORCID,Okun Danielle¹^ORCID,DiFranzo Dominic¹^ORCID,Chen Brian Y¹^ORCID

Affiliation:

1. Computer Science and Engineering, Lehigh University, Bethlehem, PA, United States

Funder

National Institutes of Health

Publisher

ACM

Link

https://dl.acm.org/doi/pdf/10.1145/3584371.3612948

Reference12 articles.

1. BioContainers: an open-source and community-driven framework for software standardization

2. An Analysis of the Server Characteristics and Resource Utilization in Google Cloud

3. Data-Centric Communication and Containerization for Future Automotive Software Architectures

4. Serghei Mangul , Thiago Mosqueiro , Richard J Abdill , Dat Duong , Keith Mitchell , Varuni Sarwal , Brian Hill , Jaqueline Brito , Russell Jared Littman , Benjamin Statz, et al. 2019 . Challenges and recommendations to improve the installability and archival stability of omics computational tools. PLoS biology 17, 6 (2019), e3000333. Serghei Mangul, Thiago Mosqueiro, Richard J Abdill, Dat Duong, Keith Mitchell, Varuni Sarwal, Brian Hill, Jaqueline Brito, Russell Jared Littman, Benjamin Statz, et al. 2019. Challenges and recommendations to improve the installability and archival stability of omics computational tools. PLoS biology 17, 6 (2019), e3000333.