MoCL: Data-driven Molecular Fingerprint via Knowledge-aware Contrastive Learning from Molecular Graph

Author:

Sun Mengying1,Xing Jing2,Wang Huijun3,Chen Bin2,Zhou Jiayu1

Affiliation:

1. Michigan State University, East Lansing, MI, USA

2. Michigan State University, Grand Rapids, MI, USA

3. Agios Pharmaceuticals, Cambridge, MA, USA

Funder

National Science Foundation

Office of Naval Research

National Institute of Health

Publisher

ACM

Reference48 articles.

1. Yuki Markus Asano Christian Rupprecht and Andrea Vedaldi. 2019. Self-labelling via simultaneous clustering and representation learning. arXiv preprint arXiv:1911.05371(2019). Yuki Markus Asano Christian Rupprecht and Andrea Vedaldi. 2019. Self-labelling via simultaneous clustering and representation learning. arXiv preprint arXiv:1911.05371(2019).

2. Yunsheng Bai Hao Ding Yang Qiao Agustin Marinovic Ken Gu Ting Chen Yizhou Sun and Wei Wang. 2019. Unsupervised inductive whole-graph embed-ding by preserving graph proximity. (2019). Yunsheng Bai Hao Ding Yang Qiao Agustin Marinovic Ken Gu Ting Chen Yizhou Sun and Wei Wang. 2019. Unsupervised inductive whole-graph embed-ding by preserving graph proximity. (2019).

3. Why is Tanimoto index an appropriate choice for fingerprint-based similarity calculations?

4. Large Scale Online Learning of Image Similarity through Ranking

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