Parallel Automata Processor

Author:

Subramaniyan Arun1,Das Reetuparna1

Affiliation:

1. University of Michigan, Ann Arbor

Abstract

Finite State Machines (FSM) are widely used computation models for many application domains. These embarrassingly sequential applications with irregular memory access patterns perform poorly on conventional von-Neumann architectures. The Micron Automata Processor (AP) is an in-situ memory-based computational architecture that accelerates non-deterministic finite automata (NFA) processing in hardware. However, each FSM on the AP is processed sequentially, limiting potential speedups. In this paper, we explore the FSM parallelization problem in the context of the AP. Extending classical parallelization techniques to NFAs executing on AP is non-trivial because of high state-transition tracking overheads and exponential computation complexity. We present the associated challenges and propose solutions that leverage both the unique properties of the NFAs (connected components, input symbol ranges, convergence, common parent states) and unique features in the AP (support for simultaneous transitions, low-overhead flow switching, state vector cache) to realize parallel NFA execution on the AP. We evaluate our techniques against several important benchmarks including NFAs used for network intrusion detection, malware detection, text processing, protein motif searching, DNA sequencing, and data analytics. Our proposed parallelization scheme demonstrates significant speedup (25.5x on average) compared to sequential execution on AP. Prior work has already shown that sequential execution on AP is at least an order of magnitude better than GPUs, multi-core processors and Xeon Phi accelerator.

Funder

National Science Foundation

C-FAR, one of the six SRC STAR-net Centers sponsored by MARCO and DARPA

Publisher

Association for Computing Machinery (ACM)

Reference41 articles.

1. Micron Automata Processing. Retrieved May 3 2017 from http://www.micronautomata.com/ Micron Automata Processing. Retrieved May 3 2017 from http://www.micronautomata.com/

2. Micron Automata Processing D480 Documentation Design Notes. Retrieved May 3 2017 from http://www.micronautomata.com/documentation/anml_documentation/c_D480_design_notes.html Micron Automata Processing D480 Documentation Design Notes. Retrieved May 3 2017 from http://www.micronautomata.com/documentation/anml_documentation/c_D480_design_notes.html

3. Efficient string matching

4. Model checking of hierarchical state machines

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