KRATOS: Context-Aware Cell Type Classification and Interpretation using Joint Dimensionality Reduction and Clustering-Reference-Cited by-同舟云学术

KRATOS: Context-Aware Cell Type Classification and Interpretation using Joint Dimensionality Reduction and Clustering

Published:2022-08-14 Issue: Volume: Page:
ISSN:
Container-title:Proceedings of the 28th ACM SIGKDD Conference on Knowledge Discovery and Data Mining
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Author:

Zhou Zihan¹,Du Zijia²,Chaterji Somali¹

Affiliation:

1. Purdue University, West Lafayette, IN, USA

2. Shanghai Jiao Tong University, Shanghai, UNK, USA

Funder

National Institutes of Health

National Science Foundation

Publisher

ACM

Link

https://dl.acm.org/doi/pdf/10.1145/3534678.3539455

Reference44 articles.

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2. Matthew Amodio , David Van Dijk , Krishnan Srinivasan, William S Chen, Hussein Mohsen, Kevin R Moon, Allison Campbell, Yujiao Zhao, Xiaomei Wang, Manjunatha Venkataswamy, et al . 2019 . Exploring single-cell data with deep multitasking neural networks. Nature methods 16, 11 (2019), 1139--1145. Matthew Amodio, David Van Dijk, Krishnan Srinivasan, William S Chen, Hussein Mohsen, Kevin R Moon, Allison Campbell, Yujiao Zhao, Xiaomei Wang, Manjunatha Venkataswamy, et al . 2019. Exploring single-cell data with deep multitasking neural networks. Nature methods 16, 11 (2019), 1139--1145.

3. Tallulah S Andrews , Vladimir Yu Kiselev , Davis McCarthy, and Martin Hemberg. 2021 . Tutorial: guidelines for the computational analysis of single-cell RNA sequencing data. Nature protocols 16, 1 (2021), 1--9. Tallulah S Andrews, Vladimir Yu Kiselev, Davis McCarthy, and Martin Hemberg. 2021. Tutorial: guidelines for the computational analysis of single-cell RNA sequencing data. Nature protocols 16, 1 (2021), 1--9.

4. Ricard Argelaguet , Britta Velten , Damien Arnol , Sascha Dietrich , Thorsten Zenz , John C Marioni , Florian Buettner , Wolfgang Huber , and Oliver Stegle . 2018. Multi-Omics Factor Analysis-a framework for unsupervised integration of multi-omics data sets. Molecular systems biology 14, 6 ( 2018 ), e8124. Ricard Argelaguet, Britta Velten, Damien Arnol, Sascha Dietrich, Thorsten Zenz, John C Marioni, Florian Buettner, Wolfgang Huber, and Oliver Stegle. 2018. Multi-Omics Factor Analysis-a framework for unsupervised integration of multi-omics data sets. Molecular systems biology 14, 6 (2018), e8124.

5. Robert J Aumann and Lloyd S Shapley . 1974. Values of non-atomic games . Princeton University Press . Robert J Aumann and Lloyd S Shapley. 1974. Values of non-atomic games. Princeton University Press.

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