BioSEAL
Author:
Affiliation:
1. Technion, Israel
Publisher
ACM
Link
https://dl.acm.org/doi/pdf/10.1145/3383669.3398279
Reference59 articles.
1. Heterogeneous hardware/software acceleration of the BWA-MEM DNA alignment algorithm
2. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
3. Basic local alignment search tool
4. Edit Distance Cannot Be Computed in Strongly Subquadratic Time (unless SETH is false)
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1. Parallelization of the Banded Needleman & Wunsch Algorithm on UPMEM PiM Architecture for Long DNA Sequence Alignment;Proceedings of the 53rd International Conference on Parallel Processing;2024-08-12
2. Power-Efficient Pipelined Multiprocessor Architecture With Parallel Trace-Back Mechanism for Multiple Pairwise Sequence Alignment;IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems;2024-08
3. ReTAP: Processing-in-ReRAM Bitap Approximate String Matching Accelerator for Genomic Analysis;2024 Design, Automation & Test in Europe Conference & Exhibition (DATE);2024-03-25
4. TALCO: Tiling Genome Sequence Alignment Using Convergence of Traceback Pointers;2024 IEEE International Symposium on High-Performance Computer Architecture (HPCA);2024-03-02
5. WFA-FPGA: An efficient accelerator of the wavefront algorithm for short and long read genomics alignment;Future Generation Computer Systems;2023-12
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