Scientific Workflows

Author:

Liew Chee Sun1ORCID,Atkinson Malcolm P.2,Galea Michelle2,Ang Tan Fong1,Martin Paul3,Hemert Jano I. Van4

Affiliation:

1. University of Malaya, Kuala Lumpur, Malaysia

2. University of Edinburgh, Edinburgh, UK

3. University of Amsterdam, Amsterdam, Netherlands

4. Optos Plc, Dunfermline, UK

Abstract

Modern scientific collaborations have opened up the opportunity to solve complex problems that require both multidisciplinary expertise and large-scale computational experiments. These experiments typically consist of a sequence of processing steps that need to be executed on selected computing platforms. Execution poses a challenge, however, due to (1) the complexity and diversity of applications , (2) the diversity of analysis goals , (3) the heterogeneity of computing platforms , and (4) the volume and distribution of data . A common strategy to make these in silico experiments more manageable is to model them as workflows and to use a workflow management system to organize their execution. This article looks at the overall challenge posed by a new order of scientific experiments and the systems they need to be run on, and examines how this challenge can be addressed by workflows and workflow management systems. It proposes a taxonomy of workflow management system (WMS) characteristics, including aspects previously overlooked. This frames a review of prevalent WMSs used by the scientific community, elucidates their evolution to handle the challenges arising with the emergence of the “fourth paradigm,” and identifies research needed to maintain progress in this area.

Publisher

Association for Computing Machinery (ACM)

Subject

General Computer Science,Theoretical Computer Science

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