Practical Algorithms for Finding Extremal Sets

Author:

Marinov Martin1,Nash Nicholas2,Gregg David3

Affiliation:

1. Trinity College Dublin, Dublin, Ireland

2. Susquehanna International Group, Dublin, Ireland

3. Lero, Trinity College Dublin, Dublin, Ireland

Abstract

The minimal sets within a collection of sets are defined as the ones that do not have a proper subset within the collection, and the maximal sets are the ones that do not have a proper superset within the collection. Identifying extremal sets is a fundamental problem with a wide range of applications in SAT solvers, data mining, and social network analysis. In this article, we present two novel improvements of the high-quality extremal set identification algorithm, AMS-Lex , described by Bayardo and Panda. The first technique uses memoization to improve the execution time of the single-threaded variant of the AMS-Lex, while our second improvement uses parallel programming methods. In a subset of the presented experiments, our memoized algorithm executes more than 400 times faster than the highly efficient publicly available implementation of AMS-Lex. Moreover, we show that our modified algorithm's speedup is not bounded above by a constant and that it increases as the length of the common prefixes in successive input itemsets increases. We provide experimental results using both real-world and synthetic datasets, and show our multithreaded variant algorithm outperforming AMS-Lex by 3 to 6 times. We find that on synthetic input datasets, when executed using 16 CPU cores of a 32-core machine, our multithreaded program executes about as fast as the state-of-the-art parallel GPU-based program using an NVIDIA GTX 580 graphics processing unit.

Publisher

Association for Computing Machinery (ACM)

Subject

Theoretical Computer Science

Reference12 articles.

1. Roberto J. Bayardo and Biswanath Panda. 2011. Fast algorithms for finding extremal sets. In SDM. SIAM/Omnipress 25--34. Roberto J. Bayardo and Biswanath Panda. 2011. Fast algorithms for finding extremal sets. In SDM. SIAM/Omnipress 25--34.

2. Daniel Bundala Michael Codish Luís Cruz-Filipe Peter Schneider-Kamp and Jakub Závodný. 2014. Optimal-depth sorting networks. CoRR abs/1412.5302 (2014). http://arxiv.org/abs/1412.5302 Daniel Bundala Michael Codish Luís Cruz-Filipe Peter Schneider-Kamp and Jakub Závodný. 2014. Optimal-depth sorting networks. CoRR abs/1412.5302 (2014). http://arxiv.org/abs/1412.5302

3. Finding extremal sets on the GPU

4. M. Marinov and D. Gregg. 2015. On the GI-completeness of a sorting networks isomorphism. ArXiv e-prints (July 2015). M. Marinov and D. Gregg. 2015. On the GI-completeness of a sorting networks isomorphism. ArXiv e-prints (July 2015).

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