SquiggleFilter: An Accelerator for Portable Virus Detection-Reference-Cited by-同舟云学术

SquiggleFilter: An Accelerator for Portable Virus Detection

Published:2021-10-17 Issue: Volume: Page:
ISSN:
Container-title:MICRO-54: 54th Annual IEEE/ACM International Symposium on Microarchitecture
language:
Short-container-title:

Author:

Dunn Tim¹,Sadasivan Harisankar²,Wadden Jack¹,Goliya Kush¹,Chen Kuan-Yu²,Blaauw David²,Das Reetuparna¹,Narayanasamy Satish¹

Affiliation:

1. University of Michigan, United States of America

2. University of Michigan

Funder

National Science Foundation

Kahn Foundation

Publisher

ACM

Link

https://dl.acm.org/doi/pdf/10.1145/3466752.3480117

Reference63 articles.

1. Abbott. 2021. Navica App and BinaxNOW COVID-19 Ag Test Card. https://www.globalpointofcare.abbott/en/product-details/navica-binaxnow-covid-19-us.html Abbott Point of Care Testing. Abbott. 2021. Navica App and BinaxNOW COVID-19 Ag Test Card. https://www.globalpointofcare.abbott/en/product-details/navica-binaxnow-covid-19-us.html Abbott Point of Care Testing.

2. Clive Brown. 2019. Technology Update. (2019). https://nanoporetech.com/resource-centre/nanopore-community-meeting-2019-technology-update Nanopore Community Meeting. Clive Brown. 2019. Technology Update. (2019). https://nanoporetech.com/resource-centre/nanopore-community-meeting-2019-technology-update Nanopore Community Meeting.

3. CADDE. 2020. Brazil-UK Centre for Arbovirus Discovery Diagnosis Genomics and Epidemiology. https://cadde.s3.climb.ac.uk/SP1-raw.tgz CADDE. 2020. Brazil-UK Centre for Arbovirus Discovery Diagnosis Genomics and Epidemiology. https://cadde.s3.climb.ac.uk/SP1-raw.tgz

Cited by 21 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. GenArchBench: A genomics benchmark suite for arm HPC processors;Future Generation Computer Systems;2024-08

2. Systems Challenges and Opportunities for Genomics;Computer;2024-08

3. RawHash2: mapping raw nanopore signals using hash-based seeding and adaptive quantization;Bioinformatics;2024-07-30

4. MegIS: High-Performance, Energy-Efficient, and Low-Cost Metagenomic Analysis with In-Storage Processing;2024 ACM/IEEE 51st Annual International Symposium on Computer Architecture (ISCA);2024-06-29

5. Sigmoni: classification of nanopore signal with a compressed pangenome index;Bioinformatics;2024-06-28