CRISPR–Cas9 Screening Identifies KRAS-Induced COX2 as a Driver of Immunotherapy Resistance in Lung Cancer

Author:

Boumelha Jesse1ORCID,de Castro Andrea1ORCID,Bah Nourdine2ORCID,Cha Hongui34ORCID,de Carné Trécesson Sophie1ORCID,Rana Sareena1ORCID,Tomaschko Mona1ORCID,Anastasiou Panayiotis1ORCID,Mugarza Edurne1ORCID,Moore Christopher1ORCID,Goldstone Robert2ORCID,East Phil2ORCID,Litchfield Kevin4ORCID,Lee Se-Hoon3ORCID,Molina-Arcas Miriam1ORCID,Downward Julian1ORCID

Affiliation:

1. Oncogene Biology Laboratory, Francis Crick Institute, London, United Kingdom. 1

2. Bioinformatics and Biostatistics, Francis Crick Institute, London, United Kingdom. 2

3. Division of Hematology-Oncology, Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Republic of Korea. 3

4. Cancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, United Kingdom. 4

Abstract

Abstract Oncogenic KRAS impairs antitumor immune responses. As effective strategies to combine KRAS inhibitors and immunotherapies have so far proven elusive, a better understanding of the mechanisms by which oncogenic KRAS drives immune evasion is needed to identify approaches that could sensitize KRAS-mutant lung cancer to immunotherapy. In vivo CRISPR–Cas9 screening in an immunogenic murine lung cancer model identified mechanisms by which oncogenic KRAS promotes immune evasion, most notably via upregulation of immunosuppressive COX2 in cancer cells. Oncogenic KRAS potently induced COX2 in both mouse and human lung cancer, which was suppressed using KRAS inhibitors. COX2 acted via prostaglandin E2 (PGE2) to promote resistance to immune checkpoint blockade (ICB) in lung adenocarcinoma. Targeting COX2/PGE2 remodeled the tumor microenvironment by inducing proinflammatory polarization of myeloid cells and influx of activated cytotoxic CD8+ T cells, which increased the efficacy of ICB. Restoration of COX2 expression contributed to tumor relapse after prolonged KRAS inhibition. These results provide the rationale for testing COX2/PGE2 pathway inhibitors in combination with KRASG12C inhibition or ICB in patients with KRAS-mutant lung cancer. Significance: COX2 signaling via prostaglandin E2 is a major mediator of immune evasion driven by oncogenic KRAS that promotes immunotherapy and KRAS-targeted therapy resistance, suggesting effective combination treatments for KRAS-mutant lung cancer.

Funder

HORIZON EUROPE European Research Council

Cancer Research UK

Medical Research Foundation

Wellcome Trust

'la Caixa' Foundation

Publisher

American Association for Cancer Research (AACR)

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