An Immunogenic Model of KRAS-Mutant Lung Cancer Enables Evaluation of Targeted Therapy and Immunotherapy Combinations

Author:

Boumelha Jesse1ORCID,de Carné Trécesson Sophie1ORCID,Law Emily K.2345ORCID,Romero-Clavijo Pablo1ORCID,Coelho Matthew A.1,Ng Kevin W.6ORCID,Mugarza Edurne1,Moore Christopher1ORCID,Rana Sareena17,Caswell Deborah R.8ORCID,Murillo Miguel17ORCID,Hancock David C.1,Argyris Prokopios P.23459ORCID,Brown William L.234ORCID,Durfee Cameron23410ORCID,Larson Lindsay K.234ORCID,Vogel Rachel I.311ORCID,Suárez-Bonnet Alejandro1213ORCID,Priestnall Simon L.1213ORCID,East Philip14ORCID,Ross Sarah J.15ORCID,Kassiotis George6,Molina-Arcas Miriam1ORCID,Swanton Charles8ORCID,Harris Reuben23451016ORCID,Downward Julian17ORCID

Affiliation:

1. 1Oncogene Biology Laboratory, Francis Crick Institute, London, United Kingdom.

2. 2Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, Minnesota.

3. 3Masonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.

4. 4Institute for Molecular Virology, University of Minnesota, Minneapolis, Minnesota.

5. 5Howard Hughes Medical Institute, University of Minnesota, Minneapolis, Minnesota.

6. 6Retroviral Immunology Laboratory, Francis Crick Institute, London, United Kingdom.

7. 7Lung Cancer Group, Division of Molecular Pathology, Institute of Cancer Research, London, United Kingdom.

8. 8Translational Cancer Therapeutics Laboratory, Francis Crick Institute, London, United Kingdom.

9. 9Division of Oral and Maxillofacial Pathology, School of Dentistry, University of Minnesota, Minneapolis, Minnesota.

10. 10Department of Biochemistry and Structural Biology, University of Texas Health San Antonio, San Antonio, Texas.

11. 11Department of Obstetrics, Gynecology, and Women's Health, University of Minnesota, Minneapolis, Minnesota.

12. 12Experimental Histopathology, Francis Crick Institute, London, United Kingdom.

13. 13Department of Pathobiology and Population Sciences, Royal Veterinary College, Hatfield, United Kingdom.

14. 14Bioinformatics and Biostatistics, Francis Crick Institute, London, United Kingdom.

15. 15AstraZeneca Oncology R&D, Cambridge, United Kingdom.

16. 16Howard Hughes Medical Institute, University of Texas Health San Antonio, San Antonio, Texas.

Abstract

AbstractMutations in oncogenes such as KRAS and EGFR cause a high proportion of lung cancers. Drugs targeting these proteins cause tumor regression but ultimately fail to elicit cures. As a result, there is an intense interest in how to best combine targeted therapies with other treatments, such as immunotherapies. However, preclinical systems for studying the interaction of lung tumors with the host immune system are inadequate, in part due to the low tumor mutational burden in genetically engineered mouse models. Here we set out to develop mouse models of mutant KRAS–driven lung cancer with an elevated tumor mutational burden by expressing the human DNA cytosine deaminase, APOBEC3B, to mimic the mutational signature seen in human lung cancer. This failed to substantially increase clonal tumor mutational burden and autochthonous tumors remained refractory to immunotherapy. However, establishing clonal cell lines from these tumors enabled the generation of an immunogenic syngeneic transplantation model of KRAS-mutant lung adenocarcinoma that was sensitive to immunotherapy. Unexpectedly, antitumor immune responses were not directed against neoantigens but instead targeted derepressed endogenous retroviral antigens. The ability of KRASG12C inhibitors to cause regression of KRASG12C -expressing tumors was markedly potentiated by the adaptive immune system, highlighting the importance of using immunocompetent models for evaluating targeted therapies. Overall, this model provides a unique opportunity for the study of combinations of targeted and immunotherapies in immune-hot lung cancer.Significance:This study develops a mouse model of immunogenic KRAS-mutant lung cancer to facilitate the investigation of optimal combinations of targeted therapies with immunotherapies.

Funder

HORIZON EUROPE European Research Council

Medical Research Council

Wellcome Trust

Cancer Research UK

Publisher

American Association for Cancer Research (AACR)

Subject

Cancer Research,Oncology

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