An Unbiased Functional Genetics Screen Identifies Rare Activating ERBB4 Mutations

Author:

Chakroborty Deepankar1234,Ojala Veera K.1234ORCID,Knittle Anna M.1,Drexler Jasmin5,Tamirat Mahlet Z.678,Ruzicka Regina5,Bosch Karin5,Woertl Johanna5,Schmittner Susanne5,Elo Laura L.14ORCID,Johnson Mark S.67ORCID,Kurppa Kari J.124ORCID,Solca Flavio5ORCID,Elenius Klaus1249ORCID

Affiliation:

1. 1Institute of Biomedicine, University of Turku, Turku, Finland.

2. 2Medicity Research Laboratories, University of Turku, Turku, Finland.

3. 3Turku Doctoral Programme of Molecular Medicine, Turku, Finland.

4. 4Turku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.

5. 5Boehringer Ingelheim RCV GmbH & Co KG, Vienna, Austria.

6. 6Structural Bioinformatics Laboratory, Biochemistry, Faculty of Science and Engineering, Åbo Akademi University, Turku, Finland.

7. 7InFLAMES Research Flagship Center, Åbo Akademi University, Turku, Finland.

8. 8Graduate School of Åbo Akademi University (Informational and Structural Biology Doctoral Network), Turku, Finland.

9. 9Department of Oncology, Turku University Hospital, Turku, Finland.

Abstract

Despite the relatively high frequency of somatic ERBB4 mutations in various cancer types, only a few activating ERBB4 mutations have been characterized, primarily due to lack of mutational hotspots in the ERBB4 gene. Here, we utilized our previously published pipeline, an in vitro screen for activating mutations, to perform an unbiased functional screen to identify potential activating ERBB4 mutations from a randomly mutated ERBB4 expression library. Ten potentially activating ERBB4 mutations were identified and subjected to validation by functional and structural analyses. Two of the 10 ERBB4 mutants, E715K and R687K, demonstrated hyperactivity in all tested cell models and promoted cellular growth under two-dimensional and three-dimensional culture conditions. ERBB4 E715K also promoted tumor growth in in vivo Ba/F3 cell mouse allografts. Importantly, all tested ERBB4 mutants were sensitive to the pan-ERBB tyrosine kinase inhibitors afatinib, neratinib, and dacomitinib. Our data indicate that rare ERBB4 mutations are potential candidates for ERBB4-targeted therapy with pan-ERBB inhibitors. Statement of Significance: ERBB4 is a member of the ERBB family of oncogenes that is frequently mutated in different cancer types but the functional impact of its somatic mutations remains unknown. Here, we have analyzed the function of over 8,000 randomly mutated ERBB4 variants in an unbiased functional genetics screen. The data indicate the presence of rare activating ERBB4 mutations in cancer, with potential to be targeted with clinically approved pan-ERBB inhibitors.

Funder

Academy of Finland

Suomen Kulttuurirahasto

K. Albin Johanssons Stiftelse

Juhani Ahon Lääketieteen Tutkimussäätiö

Maud Kuistilan Muistosäätiö

Magnus Ehrnroothin Säätiö

Orionin Tutkimussäätiö

Sigrid Juséliuksen Säätiö

Biocenter Finland

Instrumentariumin Tiedesäätiö

Turun Yliopistollinen Keskussairaala

Publisher

American Association for Cancer Research (AACR)

Reference88 articles.

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