Genome of Drosophila suzukii, the Spotted Wing Drosophila-Reference-Cited by-同舟云学术

Genome of Drosophila suzukii, the Spotted Wing Drosophila

Published:2013-12-01 Issue:12 Volume:3 Page:2257-2271
ISSN:2160-1836
Container-title:G3 Genes|Genomes|Genetics
language:en
Short-container-title:

Author:

Chiu Joanna C¹¹,Jiang Xuanting²,Zhao Li³,Hamm Christopher A³,Cridland Julie M³,Saelao Perot³,Hamby Kelly A¹,Lee Ernest K⁴,Kwok Rosanna S¹,Zhang Guojie²,Zalom Frank G¹,Walton Vaughn M⁵,Begun David J³

Affiliation:

1. Department of Entomology and Nematology, College of Agricultural and Environmental Sciences, University of California, Davis, California 95616

2. China National Genebank, BGI-Shenzhen, 518083, China

3. Department of Evolution and Ecology, College of Biological Sciences, University of California, Davis, California 95616

4. Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York 10024

5. Department of Horticulture, Oregon State University, Corvallis, Oregon 97331

Abstract

Abstract Drosophila suzukii Matsumura (spotted wing drosophila) has recently become a serious pest of a wide variety of fruit crops in the United States as well as in Europe, leading to substantial yearly crop losses. To enable basic and applied research of this important pest, we sequenced the D. suzukii genome to obtain a high-quality reference sequence. Here, we discuss the basic properties of the genome and transcriptome and describe patterns of genome evolution in D. suzukii and its close relatives. Our analyses and genome annotations are presented in a web portal, SpottedWingFlyBase, to facilitate public access.

Publisher

Oxford University Press (OUP)

Subject

Genetics(clinical),Genetics,Molecular Biology

Link

http://academic.oup.com/g3journal/article-pdf/3/12/2257/37067247/g3journal2257.pdf

Reference74 articles.

1. The genomic sequence of Drosophila melanogaster.;Adams;Science,2000

2. Basic local alignment search tool.;Altschul;J. Mol. Biol.,1990

3. Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila.;Bai;Genome Biol.,2007

4. The cytochrome P450(CYP) gene superfamily in Daphnia pulex.;Baldwin;BMC Genomics,2009

5. Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans.;Begun;PLoS Biol.,2007

Cited by 120 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Protocol for genetic engineering in Drosophila suzukii using microinjection;STAR Protocols;2024-09

2. Transcriptome analysis of Drosophila suzukii reveals molecular mechanisms conferring pyrethroid and spinosad resistance;Scientific Reports;2024-08-27

3. Transcriptome analysis ofDrosophila suzukiireveals molecular mechanisms conferring pyrethroid and spinosad resistance;2024-06-22

4. A small-molecule approach to restore female sterility phenotype targeted by a homing suppression gene drive in the fruit pest Drosophila suzukii;PLOS Genetics;2024-04-05

5. Higher evolutionary dynamics of gene copy number for Drosophila glue genes located near short repeat sequences;BMC Ecology and Evolution;2024-02-02