MAPfastR: Quantitative Trait Loci Mapping in Outbred Line Crosses

Author:

Nelson Ronald M112,Nettelblad Carl3,Pettersson Mats E12,Shen Xia14,Crooks Lucy45,Besnier Francois2,Álvarez-Castro José M267,Rönnegård Lars28,Ek Weronica2,Sheng Zheya129,Kierczak Marcin12,Holmgren Sverker3,Carlborg Örjan12

Affiliation:

1. Department of Clinical Sciences, Swedish University of Agricultural Sciences, SE-75007 Uppsala, Sweden

2. Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, SE-75651 Uppsala, Sweden

3. Department of Information Technology, Uppsala University, SE-75105 Uppsala, Sweden

4. Department of Cell and Molecular Biology, Uppsala University, BMC SE-75124 Uppsala, Sweden

5. Welcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1HH, United Kingdom

6. Department of Genetics, University of Santiago de Compostela, ES-27002 Lugo, Galiza, Spain

7. Instituto Gulbenkian de Ciência, Evolutionary Genetics Group, Oeiras, Portugal

8. Statistics Unit, Dalarna University, SE-791 88 Falun, Sweden

9. State Key Laboratory for Agro-Biotechnology, China Agricultural University,100193, Beijing, People’s Republic of China

Abstract

Abstract MAPfastR is a software package developed to analyze quantitative trait loci data from inbred and outbred line-crosses. The package includes a number of modules for fast and accurate quantitative trait loci analyses. It has been developed in the R language for fast and comprehensive analyses of large datasets. MAPfastR is freely available at: http://www.computationalgenetics.se/?page_id=7

Publisher

Oxford University Press (OUP)

Subject

Genetics (clinical),Genetics,Molecular Biology

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