Predicted MHC peptide binding promiscuity explains MHC class I ‘hotspots’ of antigen presentation defined by mass spectrometry eluted ligand data-Reference-Cited by-同舟云学术

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Predicted MHC peptide binding promiscuity explains MHC class I ‘hotspots’ of antigen presentation defined by mass spectrometry eluted ligand data

Published:2018-03-08 Issue:3 Volume:154 Page:407-417
ISSN:0019-2805
Container-title:Immunology
language:en
Short-container-title:Immunology

Author:

Jappe Emma Christine¹²,Kringelum Jens¹,Trolle Thomas¹,Nielsen Morten²³^ORCID

Affiliation:

1. Evaxion Biotech; Copenhagen Denmark

2. Department of Bio and Health Informatics; Technical University of Denmark; Lyngby Denmark

3. Instituto de Investigaciones Biotecnológicas; Universidad Nacional de San Martín; San Martín Buenos Aires Argentina

Funder

Evaxion Biotech

Publisher

Wiley

Subject

Immunology,Immunology and Allergy

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1111/imm.12905/fullpdf

Reference17 articles.

1. Analysis of major histocompatibility complex (MHC) immunopeptidomes using mass spectrometry;Caron;Mol Cell Proteomics,2015

2. Direct identification of clinically relevant neoepitopes presented on native human melanoma tissue by mass spectrometry;Bassani-Sternberg;Nat Commun,2016

3. Mass spectrometry profiling of HLA-associated peptidomes in mono-allelic cells enables more accurate epitope prediction;Abelin;Immunity,2017

4. Immunoinformatics and epitope prediction in the age of genomic medicine;Backert;Genome Med,2015

5. Whole-genome immunoinformatic analysis of F. tularensis: predicted CTL epitopes clustered in hotspots are prone to elicit a T-cell response;Zvi;PLoS ONE,2011

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1. Systematic discovery of neoepitope–HLA pairs for neoantigens shared among patients and tumor types;Nature Biotechnology;2023-10-19

2. How mass spectrometric interrogation of MHC class I ligandomes has advanced our understanding of immune responses to viruses;Seminars in Immunology;2023-07

3. Primate protein-ligand interfaces exhibit significant conservation and unveil human-specific evolutionary drivers;PLOS Computational Biology;2023-03-23

4. Cancer Antigens: Sources, Generation, and Presentation;Handbook of Cancer and Immunology;2023

5. Discovery of prevalent, clinically actionable tumor neoepitopes via integrated biochemical and cell-based platforms;2022-10-28

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