Within- and across-breed imputation of high-density genotypes in dairy and beef cattle from medium- and low-density genotypes
Author:
Affiliation:
1. Animal & Grassland Research and Innovation Centre; Cork Ireland
2. Irish Cattle Breeding Federation; Cork Ireland
3. Animal & Grassland Research and Innovation Centre; Galway Ireland
Funder
Irish Department of Agriculture Research Stimulus Fund
Science Foundation Ireland
Irish dairy and beef industry
Publisher
Wiley
Subject
Animal Science and Zoology,Food Animals,General Medicine
Link
http://onlinelibrary.wiley.com/wol1/doi/10.1111/jbg.12067/fullpdf
Reference25 articles.
1. Imputation of genotypes from low-to high-density genotyping platforms and implications for genomic selection;Berry;Anim,2011
2. Design of a bovine low-density SNP array optimised for imputation;Boichard;PLoS One,2012
3. Genotype imputation within and across Nordic cattle breeds;Brøndum;J. Dairy Sci.,2012
4. Rapid and accurate haplotype phasing and missing data inference for whole genome association studies using localized haplotype clustering;Browning;Am. J. Hum. Genet.,2007
5. A unified approach to genotype imputation and haplotype phase inference for large data sets of trios and unrelated individuals;Browning;Am. J. Hum. Genet.,2009
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