Causes and analytical impacts of missing data in RADseq phylogenetics: Insights from an African frog (Afrixalus )-Reference-Cited by-同舟云学术

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Causes and analytical impacts of missing data in RADseq phylogenetics: Insights from an African frog (Afrixalus )

Published:2019-01-21 Issue:2 Volume:48 Page:157-167
ISSN:0300-3256
Container-title:Zoologica Scripta
language:en
Short-container-title:Zool Scr

Author:

Crotti Marco¹²³^ORCID,Barratt Christopher D.⁴⁵^ORCID,Loader Simon P.¹⁴^ORCID,Gower David J.¹^ORCID,Streicher Jeffrey W.¹^ORCID

Affiliation:

1. Department of Life Sciences; The Natural History Museum; London UK

2. Department of Life Sciences; Imperial College London; London UK

3. Institute of Biodiversity, Animal Health and Comparative Medicine; University of Glasgow; Glasgow UK

4. Department of Environmental Sciences; University of Basel; Basel Switzerland

5. German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig; Leipzig Germany

Funder

Humer-Stiftung zur Förderung des wissenschaftlichen Nachwuchses

Freiwillige Akademische Gesellschaft

Publisher

Wiley

Subject

Genetics,Molecular Biology,Animal Science and Zoology,Ecology, Evolution, Behavior and Systematics

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1111/zsc.12335/fullpdf

Reference75 articles.

1. Harnessing the power of RADseq for ecological and evolutionary genomics;Andrews;Nature Reviews Genetics,2016

2. RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling;Arnold;Molecular Ecology,2013

3. Rapid SNP discovery and genetic mapping using sequenced RAD markers;Baird;PLoS ONE,2008

4. Multiple glacial refugia lead to genetic structuring and the potential for reproductive isolation in a herbaceous plant;Barnard-Kubow;American Journal of Botany,2015

5. Vanishing refuge? Testing the forest refuge hypothesis in coastal East Africa using genome-wide sequence data for seven amphibians;Barratt;Molecular Ecology,2018

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