Transcriptional and temporal response of Populus stems to gravi-stimulation-Reference-Cited by-同舟云学术

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Transcriptional and temporal response of Populus stems to gravi-stimulation

Published:2018-05-22 Issue:7 Volume:60 Page:578-590
ISSN:1672-9072
Container-title:Journal of Integrative Plant Biology
language:en
Short-container-title:J. Integr. Plant Biol.

Author:

Zinkgraf Matthew¹²,Gerttula Suzanne¹²,Zhao Shutang³,Filkov Vladimir²,Groover Andrew¹⁴

Affiliation:

1. USDA Forest Service; Pacific Southwest Research Station; 1731 Research Park Drive Davis CA 95618 USA

2. Department of Computer Science; University of California Davis; One Shields Avenue Davis CA 95618 USA

3. State Key Laboratory of Tree Genetics and Breeding; Research Institute of Forestry; Chinese Academy of Forestry; Beijing 100091 China

4. Department of Plant Biology; University of California Davis; One Shields Avenue Davis CA 95618 USA

Funder

USDA AFRI

NSF PGRP

Foundation for the National Institutes of Health

Publisher

Wiley

Subject

Plant Science,General Biochemistry, Genetics and Molecular Biology,Biochemistry

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1111/jipb.12645/fullpdf

Reference46 articles.

1. HTSeq: A Python framework to work with high-throughput sequencing data;Anders;Bioinformatics,2015

2. Biosynthesis of cellulose-enriched tension wood in Populus: Global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis;Andersson-Gunnerås;Plant J,2006

3. Acclimation of mechanical and hydraulic functions in trees: Impact of the thigmomorphogenetic process;Badel;Front Plant Sci,2015

4. Studying and modelling dynamic biological processes using time-series gene expression data;Bar-Joseph;Nat Rev Genet,2012

5. Transcript profiling of Populus tomentosa genes in normal, tension, and opposite wood by RNA-seq;Chen;BMC Genomics,2015

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1. A COBRA family protein, PtrCOB3, contributes to gelatinous layer formation of tension wood fibers in poplar;Plant Physiology;2024-06-07

2. A protocol for identifying universal reference genes within a genus based on RNA-Seq data: a case study of poplar stem gene expression;Forestry Research;2024

3. Flexure wood formation via growth reprogramming in hybrid aspen involves jasmonates and polyamines and transcriptional changes resembling tension wood development;New Phytologist;2023-10-19

4. Bouncing back stronger: Diversity, structure, and molecular regulation of gelatinous fiber development;Current Opinion in Plant Biology;2022-06

5. Expression of Cellulose Synthase Genes During the Gravistimulation of Flax (Linum usitatissimum) and Poplar (Populus alba × tremula) Plants;Russian Journal of Bioorganic Chemistry;2022-06

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