Single-cell genomics based on Raman sorting reveals novel carotenoid-containing bacteria in the Red Sea

Author:

Song Yizhi1,Kaster Anne-Kristin2,Vollmers John2,Song Yanqing3,Davison Paul A.4,Frentrup Martinique2,Preston Gail M.5,Thompson Ian P.1,Murrell J. Colin6,Yin Huabing3,Hunter C. Neil4,Huang Wei E.1

Affiliation:

1. Department of Engineering Science; University of Oxford; Parks Road Oxford OX1 3PJ UK

2. Leibniz Institute DSMZ; Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH; Inhoffenstrasse 7 B 38124 Braunschweig Germany

3. Division of Biomedical Engineering; School of Engineering; University of Glasgow; Glasgow G12 8QQ UK

4. Department of Molecular Biology and Biotechnology; University of Sheffield; Sheffield S10 2TN UK

5. Department of Plant Sciences; University of Oxford; South Parks Road Oxford OX1 3RB UK

6. School of Environmental Sciences; University of East Anglia; Norwich NR4 7TJ UK

Funder

Engineering and Physical Sciences Research Council

Natural Environment Research Council

CNH

Biotechnology and Biological Sciences Research Council

Gordon and Betty Moore Foundation

Publisher

Wiley

Subject

Applied Microbiology and Biotechnology,Biochemistry,Bioengineering,Biotechnology

Reference54 articles.

1. Basic local alignment search tool;Altschul;J Mol Biol,1990

2. Phylogenetic identification and in-situ detection of individual microbial-cells without cultivation;Amann;Microbiol Rev,1995

3. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing;Bankevich;J Comput Biol,2012

4. Tracking heavy water (D2O) incorporation for identifying and sorting active microbial cells;Berry;Proc Natl Acad Sci USA,2015

5. Highly efficient DNA synthesis by the phage phi 29 DNA polymerase. DNA replication;Blanco;J Biol Chem,1989

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