Analysis of CACTA transposase genes unveils the mechanism of intron loss and distinct small RNA silencing pathways underlying divergent evolution of Brassica genomes-Reference-Cited by-同舟云学术

Analysis of CACTA transposase genes unveils the mechanism of intron loss and distinct small RNA silencing pathways underlying divergent evolution of Brassica genomes

Published:2020-11-22 Issue:1 Volume:105 Page:34-48
ISSN:0960-7412
Container-title:The Plant Journal
language:en
Short-container-title:Plant J.

Author:

Liu Beibei¹,Iwata‐Otsubo Aiko²,Yang Diya¹,Baker Robert L.¹,Liang Chun¹,Jackson Scott A.²,Liu Shengyi³,Ma Jianxin⁴^ORCID,Zhao Meixia¹^ORCID

Affiliation:

1. Department of Biology Miami University Oxford OH45056USA

2. Center for Applied Genetic Technologies University of Georgia 111 Riverbend Road Athens GA30602,USA

3. Oil Crops Research Institute Chinese Academy of Agricultural Sciences Wuhan430062China

4. Department of Agronomy Purdue University West Lafayette IN47907USA

Funder

National Institute of General Medical Sciences

National Institutes of Health

Publisher

Wiley

Subject

Cell Biology,Plant Science,Genetics

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/tpj.15037

Reference91 articles.

1. The CACTA transposonBot1played a major role inBrassicagenome divergence and gene proliferation

2. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

3. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

4. Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps

5. Analysis of CACTA transposases reveals intron loss as major factor influencing their exon/intron structure in monocotyledonous and eudicotyledonous hosts

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