Identification of a small chemical as a lysosomal calcium mobilizer and characterization of its ability to inhibit autophagy and viral infection

Author:

Zhang Kehui12,Huang Lihong34ORCID,Cai Yang56,Zhong Yi7,Chen Nanjun8,Gao Fei34,Zhang Liang56,Li Qi7,Liu Zhenming7,Zhang Rongxin910,Zhang Liangren7,Yue Jianbo611ORCID

Affiliation:

1. State Key Laboratory of Bioactive Substance and Function of Natual Medicines, Institute of Materia Medica Chinese Academy of Medical Sciences & Peking Union Medical College Beijing China

2. Beijing Key Laboratory of Active Substances Discovery and Druggability Evaluation, Institute of Materia Medica Chinese Academy of Medical Sciences & Peking Union Medical College Beijing China

3. State Key Laboratory for Animal Disease Control and Prevention South China Agricultural University Guangzhou China

4. Key Laboratory of Zoonoses, Ministry of Agriculture and Rural Affairs South China Agricultural University Guangzhou China

5. Department of Biomedical Sciences City University of Hong Kong China

6. City University of Hong Kong Shenzhen Research Institute China

7. State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences Peking University Beijing China

8. Department of Computer Science City University of Hong Kong China

9. Laboratory of Immunology and Inflammation, Institute of Basic Medical Sciences Guangdong Pharmaceutical University Guangzhou China

10. Department of Biotechnology, School of Life Sciences and Biopharmaceutics Guangdong Pharmaceutical University Guangzhou China

11. Division of Natural and Applied Sciences Duke Kunshan University Kunshan China

Abstract

We previously identified glyceraldehyde 3‐phosphate dehydrogenase (GAPDH) as one of the cyclic adenosine diphosphoribose (cADPR)'s binding proteins and found that GAPDH participates in cADPR‐mediated Ca2+ release from endoplasmic reticulum via ryanodine receptors (RyRs). Here, we aimed to chemically synthesise and pharmacologically characterise novel cADPR analogues. Based on the simulated cADPR–GAPDH complex structure, we performed the structure‐based drug screening, identified several small chemicals with high docking scores to cADPR's binding pocket in GAPDH and showed that two of these compounds, C244 and C346, are potential cADPR antagonists. We further synthesised several analogues of C346 and found that its analogue, G42, also mobilised Ca2+ release from lysosomes. G42 alkalised lysosomal pH and inhibited autophagosome–lysosome fusion. Moreover, G42 markedly inhibited Zika virus (ZIKV, a flavivirus) or murine hepatitis virus (MHV, a β‐coronavirus) infections of host cells. These results suggest that G42 inhibits virus infection, likely by triggering lysosomal Ca2+ mobilisation and inhibiting autophagy.

Funder

National Natural Science Foundation of China

Science, Technology and Innovation Commission of Shenzhen Municipality

Innovation and Technology Fund

Publisher

Wiley

Subject

Cell Biology,Molecular Biology,Biochemistry

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