Developing model systems for dinoflagellates in the post‐genomic era

Author:

Ishida Hisatake1ORCID,John Uwe23ORCID,Murray Shauna A.4ORCID,Bhattacharya Debashish5ORCID,Chan Cheong Xin1ORCID

Affiliation:

1. School of Chemistry and Molecular Biosciences, Australian Centre for Ecogenomics The University of Queensland Brisbane Queensland Australia

2. Alfred‐Wegener‐Institute Helmholtz Centre for Polar and Marine Research Bremerhaven Germany

3. Helmholtz Institute for Functional Marine Biodiversity Oldenburg Germany

4. School of Life Sciences University of Technology Sydney Ultimo New South Wales Australia

5. Department of Biochemistry and Microbiology Rutgers University New Brunswick New Jersey USA

Abstract

AbstractDinoflagellates are a diverse group of eukaryotic microbes that are ubiquitous in aquatic environments. Largely photosynthetic, they encompass symbiotic, parasitic, and free‐living lineages with a broad spectrum of trophism. Many free‐living taxa can produce bioactive secondary metabolites such as biotoxins, some of which cause harmful algal blooms. In contrast, most symbiotic species are crucial for sustaining coral reef health. The year 2023 marked a decade since the first genome data of dinoflagellates became available. The growing genome‐scale resources for these taxa are highlighting their remarkable evolutionary and genomic complexities. Here, we discuss the prospect of developing dinoflagellate models using the criteria of accessibility, tractability, resources, research support, and promise. Moving forward in the post‐genomic era, we argue for the development of fit‐to‐purpose models that tailor to specific biological contexts, and that a one‐size‐fits‐all model is inadequate for encapsulating the complex biology, ecology, and evolutionary history of dinoflagellates.

Funder

Australian Academy of Science

Australian Research Council

National Institute of Food and Agriculture

University of Queensland

Publisher

Wiley

Subject

Plant Science,Aquatic Science

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