POU3F3‐related disorder: Defining the phenotype and expanding the molecular spectrum

Author:

Rossi Alessandra12,Blok Lot Snijders3,Neuser Sonja4,Klöckner Chiara4,Platzer Konrad4ORCID,Faivre Laurence Olivier56,Weigand Heike7,Dentici Maria L.89ORCID,Tartaglia Marco8ORCID,Niceta Marcello8ORCID,Alfieri Paolo10ORCID,Srivastava Siddharth11,Coulter David11,Smith Lacey11,Vinorum Kristin12,Cappuccio Gerarda1314,Brunetti‐Pierri Nicola131415ORCID,Torun Deniz16ORCID,Arslan Mutluay17,Lauridsen Mathilde F.18ORCID,Murch Oliver19,Irving Rachel19,Lynch Sally A.20,Mehta Sarju G.21,Carmichael Jenny21,Zonneveld‐Huijssoon Evelien22,de Vries Bert3,Kleefstra Tjitske3,Johannesen Katrine M.123,Westphall Ian T.24,Hughes Susan S.25,Smithson Sarah26,Evans Julie27,Dudding‐Byth Tracy28,Simon Marleen29,van Binsbergen Ellen29,Herkert Johanna C.22,Beunders Gea22,Oppermann Henry4,Bakal Mert30,Møller Rikke S.131,Rubboli Guido132,Bayat Allan13133

Affiliation:

1. Department of Epilepsy Genetics and Personalized Medicine Danish Epilepsy Center, member of the ERN‐EpiCARE Dianalund Denmark

2. Pediatric Clinic, IRCCS San Matteo Hospital Foundation University of Pavia Pavia Italy

3. Human Genetics Department Radboud University Medical Center Nijmegen the Netherlands

4. Institute of Human Genetics University of Leipzig Medical Center Leipzig Germany

5. Centre de Référence Anomalies du Développement et Syndromes Malformatifs, FHU TRANSLAD Centre Hospitalier Universitaire Dijon Dijon France

6. Genetics of Developmental Disorders Team INSERM – Bourgogne Franche‐Comté University, UMR 1231 GAD Dijon France

7. Department of Pediatric Neurology, Developmental Medicine and Social Pediatrics, Dr. von Hauner's Children's Hospital University of Munich Munich Germany

8. Genetics and Rare Diseases Research Division Ospedale Pediatrico Bambino Gesù, IRCCS Rome Italy

9. Medical Genetics Unit, Academic Department of Pediatrics Bambino Gesù Children's Hospital, IRCCS Rome Italy

10. Child and Adolescent Neuropsychiatry Unit, Department of Neuroscience Bambino Gesù Children's Hospital, IRCCS Rome Italy

11. Department of Neurology Boston Children's Hospital Boston Massachusetts USA

12. Rikshospitalet Oslo University Hospital Oslo Norway

13. Department of Translational Medicine Federico II University Naples Italy

14. Telethon Institute of Genetics and Medicine Naples Italy

15. Scuola Superiore Meridionale School for Advanced Studies Naples Italy

16. Department of Medical Genetics, Gülhane Faculty of Medicine University of Health Sciences Ankara Turkey

17. Department of Pediatric Neurology, Gülhane Faculty of Medicine University of Health Sciences Ankara Turkey

18. Department of Clinical Genetics Vejle Hospital Vejle Denmark

19. All Wales Medical Genomics Service University Hospital of Wales Cardiff UK

20. Children's Health Ireland at Crumlin Dublin 12 Ireland

21. Cambridge University Hospitals NHS Foundation Trust Cambridge UK

22. Department of Genetics University of Groningen, University Medical Center Groningen Groningen The Netherlands

23. Department of Genetics University Hospital of Copenhagen Copenhagen Denmark

24. Department of Paediatrics Copenhagen University Hospital Hvidovre Denmark

25. Division of Genetics Children's Mercy Kansas City Kansas City Missouri USA

26. Department of Clinical Genetics University Hospitals Bristol and Weston NHS Foundation Trust Bristol UK

27. Bristol Genetics Laboratory, North Bristol NHS Trust, Pathology Sciences Building, Southmead Hospital Bristol UK

28. NSW Genetics of Learning Disability (GOLD) Service University of Newcastle New South Wales Australia

29. Department of Medical Genetics University Medical Centre Utrecht Utrecht The Netherlands

30. Clinic of Radiology University of Health Sciences Turkey, Haseki Training and Research Hospital Istanbul Turkey

31. Department of Regional Health Research University of Southern Denmark Odense Denmark

32. Institute of Clinical Medicine Copenhagen University Copenhagen Denmark

33. Department of Drug Design and Pharmacology University of Copenhagen Copenhagen Denmark

Abstract

AbstractPOU3F3 variants cause developmental delay, behavioral problems, hypotonia and dysmorphic features. We investigated the phenotypic and genetic landscape, and genotype–phenotype correlations in individuals with POU3F3‐related disorders. We recruited unpublished individuals with POU3F3 variants through international collaborations and obtained updated clinical data on previously published individuals. Trio exome sequencing or single exome sequencing followed by segregation analysis were performed in the novel cohort. Functional effects of missense variants were investigated with 3D protein modeling. We included 28 individuals (5 previously published) from 26 families carrying POU3F3 variants; 23 de novo and one inherited from an affected parent. Median age at study inclusion was 7.4 years. All had developmental delay mainly affecting speech, behavioral difficulties, psychiatric comorbidities and dysmorphisms. Additional features included gastrointestinal comorbidities, hearing loss, ophthalmological anomalies, epilepsy, sleep disturbances and joint hypermobility. Autism, hearing and eye comorbidities, dysmorphisms were more common in individuals with truncating variants, whereas epilepsy was only associated with missense variants. In silico structural modeling predicted that all (likely) pathogenic variants destabilize the DNA‐binding region of POU3F3. Our study refined the phenotypic and genetic landscape of POU3F3‐related disorders, it reports the functional properties of the identified pathogenic variants, and delineates some genotype–phenotype correlations.

Funder

Fondazione Telethon

National Institute of Neurological Disorders and Stroke

Novo Nordisk Fonden

Publisher

Wiley

Subject

Genetics (clinical),Genetics

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