QUAREP‐LiMi: A community‐driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy-Reference-Cited by-同舟云学术

QUAREP‐LiMi: A community‐driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy

Published:2021-08-11 Issue:1 Volume:284 Page:56-73
ISSN:0022-2720
Container-title:Journal of Microscopy
language:en
Short-container-title:Journal of Microscopy

Author:

Nelson Glyn¹^ORCID,Boehm Ulrike²^ORCID,Bagley Steve³,Bajcsy Peter⁴,Bischof Johanna⁵,Brown Claire M.⁶,Dauphin Aurélien⁷,Dobbie Ian M.⁸,Eriksson John E.⁹,Faklaris Orestis¹⁰,Fernandez‐Rodriguez Julia¹¹,Ferrand Alexia¹²,Gelman Laurent¹³,Gheisari Ali¹⁴,Hartmann Hella¹⁴,Kukat Christian¹⁵,Laude Alex¹,Mitkovski Miso¹⁶,Munck Sebastian¹⁷,North Alison J.¹⁸,Rasse Tobias M.¹⁹,Resch‐Genger Ute²⁰,Schuetz Lucas C.²¹,Seitz Arne²²,Strambio‐De‐Castillia Caterina²³,Swedlow Jason R.²⁴,Alexopoulos Ioannis²⁵,Aumayr Karin²⁶,Avilov Sergiy²⁷,Bakker Gert‐Jan²⁸,Bammann Rodrigo R.²⁹,Bassi Andrea³⁰,Beckert Hannes³¹,Beer Sebastian³²,Belyaev Yury³³,Bierwagen Jakob³⁴,Birngruber Konstantin A.³⁵,Bosch Manel³⁶,Breitlow Juergen³⁷,Cameron Lisa A.³⁸,Chalfoun Joe⁴,Chambers James J.³⁹,Chen Chieh‐Li⁴⁰,Conde‐Sousa Eduardo⁴¹⁴²,Corbett Alexander D.⁴³,Cordelieres Fabrice P.⁴⁴,Nery Elaine Del⁴⁵,Dietzel Ralf⁴⁶,Eismann Frank⁴⁷,Fazeli Elnaz⁴⁸,Felscher Andreas⁴⁹,Fried Hans⁵⁰,Gaudreault Nathalie⁵¹,Goh Wah Ing⁵²,Guilbert Thomas⁵³,Hadleigh Roland²⁹,Hemmerich Peter⁵⁴,Holst Gerhard A.⁵⁵,Itano Michelle S.⁵⁶,Jaffe Claudia B.⁵⁷,Jambor Helena K.⁵⁸,Jarvis Stuart C.⁵⁹,Keppler Antje⁶⁰,Kirchenbuechler David⁶¹,Kirchner Marcel¹⁵,Kobayashi Norio⁶²,Krens Gabriel⁶³,Kunis Susanne⁶⁴,Lacoste Judith⁶⁵,Marcello Marco⁶⁶,Martins Gabriel G.⁶⁷,Metcalf Daniel J.²⁹,Mitchell Claire A.⁶⁸,Moore Joshua²⁴,Mueller Tobias⁶⁹,Nelson Michael S.⁷⁰,Ogg Stephen⁷¹,Onami Shuichi⁷²,Palmer Alexandra L.⁷³,Paul‐Gilloteaux Perrine⁷⁴,Pimentel Jaime A.⁷⁵,Plantard Laure¹³,Podder Santosh⁷⁶,Rexhepaj Elton⁷⁷,Royon Arnaud⁷⁸,Saari Markku A.⁷⁹,Schapman Damien⁸⁰,Schoonderwoert Vincent⁸¹,Schroth‐Diez Britta⁸²,Schwartz Stanley⁸³,Shaw Michael⁸⁴,Spitaler Martin⁸⁵,Stoeckl Martin T.⁸⁶,Sudar Damir⁸⁷,Teillon Jeremie⁸⁸,Terjung Stefan²¹,Thuenauer Roland⁸⁹,Wilms Christian D.²⁹,Wright Graham D.⁵²,Nitschke Roland⁹⁰

Affiliation:

1. Bioimaging Unit Newcastle University Newcastle upon Tyne UK

2. Janelia Research Campus, Howard Hughes Medical Institute Ashburn Virginia USA

3. Visualisation, Irradiation & Analysis, Cancer Research UK Manchester Institute, Alderley Park Macclesfield UK

4. National Institute of Standards and Technology Gaithersburg Maryland USA

5. Euro‐BioImaging, Heidelberg Germany

6. Advanced BioImaging Facility (ABIF) McGill University, Montreal Quebec Canada

7. Unité Génétique et Biologie du Développement U934, PICT‐IBiSA Institut Curie/Inserm/CNRS/PSL Research University Paris France

8. Department of Biochemistry University of Oxford, Oxford Oxon UK

9. Turku Bioscience Centre, Euro‐Bioimaging ERIC Turku Finland

10. Biocampus, CNRS UAR 3426 Montpellier France

11. Centre for Cellular Imaging, Sahlgrenska Academy University of Gothenburg Gothenburg Sweden

12. Imaging Core Facility, Biozentrum University of Basel Basel Switzerland

13. Friedrich Miescher Institute for Biomedical Research Basel Switzerland

14. Light Microscopy Facility, CMCB Technology Platform, TU Dresden Dresden Germany

15. FACS & Imaging Core Facility, Max Planck Institute for Biology of Ageing Cologne Germany

16. Light Microscopy Facility, Max Planck Institute of Experimental Medicine Goettingen Germany

17. VIB BioImaging Core & VIB‐KU Leuven Center for Brain and Disease Research & KU Leuven Department for Neuroscience, Leuven Flanders Belgium

18. The Rockefeller University New York New York USA

19. Scientific Service Group Microscopy, Max Planck Institute for Heart and Lung Research Bad Nauheim Germany

20. Division Biophotonics, Federal Institute for Materials Research and Testing Berlin Germany

21. European Molecular Biology Laboratory, Advanced Light Microscopy Facility Heidelberg Germany

22. Faculty of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, Lausanne Vaud Switzerland

23. Program in Molecular Medicine, University of Massachusetts Medical School Worcester Massachusetts USA

24. Divisions of Computational Biology and Gene Regulation and Expression, School of Life Sciences University of Dundee Dundee UK

25. General Instrumentation ‐ Light Microscopy Facility Faculty of Science, Radboud University Nijmegen The Netherlands

26. BioOptics Facility, IMP ‐ Research Institute of Molecular Pathology Vienna Austria

27. Max Planck Institute of Immunobiology and Epigenetics Freiburg Germany

28. Department of Cell Biology (route 283), Radboud Institute for Molecular Life Sciences Nijmegen The Netherlands

29. Scientifica Ltd., Uckfield East Sussex UK

30. Dipartimento di Fisica, Politecnico di Milano Milan Italy

31. Microscopy Core Facility Medizinische Fakultät, Universität Bonn Bonn Germany

32. Hamamatsu Photonics GmbH Herrsching Germany

33. Microscopy Imaging Center University of Bern Bern Switzerland

34. AHF analysentechnik AG Tuebingen Germany

35. TOPTICA Photonics AG Graefelfing Germany

36. Faculty of Biology Universitat de Barcelona Barcelona Spain

37. PicoQuant Berlin Germany

38. Light Microscopy Core Facility, Department of Biology Duke University Durham North Carolina USA

39. Institute for Applied Life Sciences University of Massachusetts Amherst Massachusetts USA

40. Pathware Seattle Washington USA

41. i3S ‐ Instituto de InvestigaÇão e InovaÇão em Saúde Universidade do Porto Porto Portugal

42. INEB ‐ Instituto de Engenharia Biomédica Universidade do Porto Porto Portugal

43. Department of Physics and Astronomy University of Exeter Exeter UK

44. Bordeaux Imaging Center, Bordeaux Nouvelle Aquitaine France

45. BioPhenics High‐Content Screening Laboratory (PICT‐IBiSA), Translational Research Department Institut Curie ‐ PSL Research University Paris France

46. Omicron‐Laserage Laserprodukte GmbH Rodgau Germany

47. Carl Zeiss Microscopy GmbH Jena Germany

48. University of Turku Turku Finland

49. Coherent LaserSystems GmbH & Co. KG Luebeck Germany

50. Light Microscope Facility, German Center for Neurodegenerative Diseases (DZNE) Bonn Germany

51. Allen Institute for Cell Science Seattle Washington USA

52. A*STAR Microscopy Platform, Research Support Centre, Agency for Science, Technology and Research Singapore Singapore

53. Institut Cochin, INSERM (U1016), CNRS (UMR 8104) Université de Paris (UMR‐S1016) Paris France

54. Core Facility Imaging, Leibniz Institute on Aging Jena Germany

55. Research & Science, PCO AG Kelheim Germany

56. Neuroscience Microscopy Core University of North Carolina Chapel Hill North Carolina USA

57. Lumencor, Inc. Beaverton Oregon USA

58. Mildred‐Scheel Nachwuchszentrum Universitätsklinikum Carl Gustav Carus, TU Dresden Dresden Germany

59. Prior Scientific Instruments Limited, Cambridge Cambridgeshire UK

60. EMBL Heidelberg, Global BioImaging Heidelberg Germany

61. Northwestern University Chicago Illinois USA

62. RIKEN, Wako Saitama Japan

63. Bioimaging Facility, Institute of Science and Technology Austria Klosterneuburg Austria

64. University Osnabrueck Biology/Chemistry Osnabrueck Germany

65. MIA Cellavie Inc., Montreal Quebec Canada

66. Institute of Systems, Molecular & Integrative Biology University of Liverpool, Liverpool Merseyside UK

67. Instituto Gulbenkian de Ciencia & Faculdade de Ciencias, University of Lisboa Oeiras Portugal

68. Warwick Medical School University of Warwick, Coventry West Midlands UK

69. Gregor Mendel Institute of Molecular Plant Biology (GMI) Vienna Austria

70. City of Hope Duarte California USA

71. Medical Microbiology & Immunology, University of Alberta, Edmonton Alberta Canada

72. RIKEN Center for Biosystems Dynamics Research Kobe, Hyogo Japan

73. Advanced Light Microscopy, The Francis Crick Institute London UK

74. Université de Nantes, CHU Nantes, Inserm, CNRS, SFR Santé, Inserm UMS 016 CNRS UMS 3556 F‐44000 Nantes France

75. Instituto de Biotecnología Universidad Nacional Autónoma de México, Cuernavaca Morelos Mexico

76. Microscopy Facility, Department of Biology, Indian Institute of Science Education and Research Pune Pune India

77. Sanofi Aventis, Chilly‐Mazarin Essone France

78. Argolight Pessac France

79. Turku Bioscience Centre University of Turku and Åbo Akademi University Turku Finland

80. UNIROUEN, INSERM, PRIMACEN Normandie University Rouen France

81. Scientific Volume Imaging bv, Hilversum Noord‐Holland 1213VB The Netherlands

82. Light Microscopy Facility, Max Planck Institute of Molecular Cell Biology and Genetics Dresden Germany

83. Nikon Instruments Inc. ISO Consultant Melville New York USA

84. National Physical Laboratory, Teddington Middlesex UK

85. Imaging Facility, Max Planck Institute of Biochemistry, Martinsried Munich Germany

86. Bioimaging Center, University of Konstanz Konstanz Germany

87. Quantitative Imaging Systems Portland Oregon USA

88. Bordeaux Imaging Center, Université de Bordeaux, Bordeaux Gironde France

89. Technology Platform Microscopy and Image Analysis, Heinrich Pette Institute, Leibniz Institute for Experimental Virology Hamburg Germany

90. Life Imaging Center and BIOSS Centre for Biological Signaling Studies Albert‐Ludwigs‐University Freiburg Freiburg Germany

Publisher

Wiley

Subject

Histology,Pathology and Forensic Medicine

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/jmi.13041

Reference57 articles.

1. 1,500 scientists lift the lid on reproducibility

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