Regulation of the innate immune response and gut microbiome by p53

Author:

Khor Amy Hui Ping1ORCID,Koguchi Tomoyuki2,Liu Hao1,Kakuta Masanori3,Matsubara Daisuke4,Wen Ruimeng1,Sagiya Yoji5,Imoto Seiya6,Nakagawa Hidewaki7ORCID,Matsuda Koichi15,Tanikawa Chizu1

Affiliation:

1. Laboratory of Clinical Genome Sequencing, Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences The University of Tokyo Minato City, Tokyo Japan

2. Department of Urology Fukushima Medical University School of Medicine Fukushima Japan

3. Department of Integrated Analytics, M&D Data Science Center Tokyo Medical and Dental University Tokyo Japan

4. Department of Pathology, Faculty of Medicine University of Tsukuba Ibaraki Japan

5. Laboratory of Genome Technology, Human Genome Center, The Institute of Medical Science The University of Tokyo Minato City, Tokyo Japan

6. Division of Health Medical Intelligence, Human Genome Center, The Institute of Medical Science The University of Tokyo Minato City, Tokyo Japan

7. Laboratory for Cancer Genomics RIKEN Center for Integrative Medical Sciences Yokohama Japan

Abstract

Abstractp53 is a key tumor suppressor mutated in half of human cancers. In recent years, p53 was shown to regulate a wide variety of functions. From the transcriptome analysis of 24 tissues of irradiated mice, we identified 553 genes markedly induced by p53. Gene Ontology (GO) enrichment analysis found that the most associated biological process was innate immunity. 16S rRNA‐seq analysis revealed that Akkermansia, which has anti‐inflammatory properties and is involved in the regulation of intestinal barrier integrity, was decreased in p53‐knockout (p53−/−) mice after radiation. p53−/− mice were susceptible to radiation‐induced GI toxicity and had a significantly shorter survival time than p53‐wild‐type (p53+/+) mice following radiation. However, administration of antibiotics resulted in a significant improvement in survival and protection against GI toxicity. Mbl2 and Lcn2, which have antimicrobial activity, were identified to be directly transactivated by p53 and secreted by liver into the circulatory system. We also found the expression of MBL2 and LCN2 was decreased in liver cancer tissues with p53 mutations compared with those without p53 mutations. These results indicate that p53 is involved in shaping the gut microbiome through its downstream targets related to the innate immune system, thus protecting the intestinal barrier.

Publisher

Wiley

Subject

Cancer Research,Oncology,General Medicine

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