PipeCraft: Flexible open-source toolkit for bioinformatics analysis of custom high-throughput amplicon sequencing data
Author:
Affiliation:
1. Institute of Ecology and Earth Sciences; University of Tartu; Tartu Estonia
2. Department of Organismal Biology; Evolutionary Biology Centre; Uppsala University; Uppsala Sweden
3. Natural History Museum; University of Tartu; Tartu Estonia
Funder
Eesti Teadusfondi
MOBERC
ECOLCHANGE
Publisher
Wiley
Subject
Genetics,Ecology, Evolution, Behavior and Systematics,Biotechnology
Link
http://onlinelibrary.wiley.com/wol1/doi/10.1111/1755-0998.12692/fullpdf
Reference52 articles.
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3. MICCA: a complete and accurate software for taxonomic profiling of metagenomic data;Albanese;Scientific Reports,2015
4. A method for studying protistan diversity using massively parallel sequencing of V9 hypervariable regions of small-subunit ribosomal RNA genes;Amaral-Zettler;PLoS ONE,2009
5. Andrews , S. 2010 FastQC: A quality control tool for high throughput sequence data http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
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