A from-benchtop-to-desktop workflow for validating HTS data and for taxonomic identification in diet metabarcoding studies

Author:

Corse Emmanuel1,Meglécz Emese1,Archambaud Gaït2,Ardisson Morgane3,Martin Jean-François4,Tougard Christelle5,Chappaz Rémi1,Dubut Vincent1ORCID

Affiliation:

1. Aix Marseille Univ; Avignon Univ; CNRS, IRD, UMR IMBE; Marseille France

2. Irstea; UR RECOVER; Equipe FRESCHCO; Aix-en-Provence France

3. INRA; CIRAD; Montpellier SupAgro, UMR AGAP; Montpellier France

4. Montpellier SupAgro; INRA, CIRAD, IRD, UMR CBGP; Montferrier-sur-Lez France

5. CNRS; Université de Montpellier; IRD, CIRAD, EPHE, UMR ISEM; Montpellier France

Funder

Électricité de France

Syndicat Mixte d'Aménagement du Val Durance (France)

Office National de l'Eau et des Milieux Aquatiques (France)

Agence de l'Eau Rhône Méditerranée Corse

Conseil Régional de Provence-Alpes-Côte d'Azur (France)

Publisher

Wiley

Subject

Genetics,Ecology, Evolution, Behavior and Systematics,Biotechnology

Reference72 articles.

1. Different levels of precision in studies on the alimentary tract content of omnivorous fish affect predictions of their food niche and competitive interactions;Adamczuk;Comptes Rendus Biologies,2015

2. Controlling the false discovery rate-a practical and powerful approach to multiple testing;Benjamini;Journal of the Royal Statistical Society B,1995

3. Defining operational taxonomic units using DNA barcode data;Blaxter;Philosophical Transactions of the Royal Society B Biological Sciences,2005

4. Obitools: A unix-inspired software package for DNA metabarcoding;Boyer;Molecular Ecology Resources,2016

5. DNA metabarcoding of insects and allies: An evaluation of primers and pipelines;Brandon-Mong;Bulletin of Entomological Research,2015

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3