Genome assembly and annotation ofArabidopsis halleri, a model for heavy metal hyperaccumulation and evolutionary ecology

Author:

Briskine Roman V.1,Paape Timothy1,Shimizu-Inatsugi Rie1,Nishiyama Tomoaki2,Akama Satoru3,Sese Jun3,Shimizu Kentaro K.14

Affiliation:

1. Department of Evolutionary Biology and Environmental Studies; University of Zurich; Winterthurerstrasse 190 Zurich CH-8057 Switzerland

2. Advanced Science Research Center; Kanazawa University; 13-1 Takara-machi Kanazawa 920-0934 Japan

3. Biotechnology Research Institute for Drug Discovery; National Institute of Advanced Industrial Science and Technology (AIST); 2-4-7 Aomi Koto-ku Tokyo 135-0064 Japan

4. Kihara Institute for Biological Research; Yokohama City University; 642-12 Maioka Totsuka-ward Yokohama 244-0813 Japan

Funder

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung

Universität Zürich

Ministry of Education, Culture, Sports, Science and Technology

Human Frontier Science Program

Seventh Framework Programme

Publisher

Wiley

Subject

Genetics,Ecology, Evolution, Behavior and Systematics,Biotechnology

Reference76 articles.

1. Robust control of the seasonal expression of the Arabidopsis FLC gene in a fluctuating environment;Aikawa;Proceedings of the National Academy of Sciences of the United States of America,2010

2. Genome-wide quantification of homeolog expression ratio revealed nonstochastic gene regulation in synthetic allopolyploid Arabidopsis;Akama;Nucleic Acids Research,2014

3. Taxonomy and phylogeny of Arabidopsis (Brassicaceae);Al-Shehbaz;The Arabidopsis Book / American Society of Plant Biologists,2002

4. AUGUSTUS Development Team 2014 Incorporating RNAseq data into AUGUSTUS with TopHat. http://bioinf.uni-greifswald.de/bioinf/wiki/pmwiki.php?n=IncorporatingRNAseq.Tophat

5. The transition to self-compatibility in Arabidopsis thaliana and evolution within S-haplotypes over 10 myr;Bechsgaard;Molecular Biology and Evolution,2006

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