Considering external information to improve the phylogenetic comparison of microbial communities: a new approach based on constrained Double Principal Coordinates Analysis (cDPCoA)-Reference-Cited by-同舟云学术

Considering external information to improve the phylogenetic comparison of microbial communities: a new approach based on constrained Double Principal Coordinates Analysis (cDPCoA)

Published:2014-07-18 Issue:2 Volume:15 Page:242-249
ISSN:1755-098X
Container-title:Molecular Ecology Resources
language:en
Short-container-title:Mol Ecol Resour

Author:

Dray S.¹²,Pavoine S.³⁴,Aguirre de Cárcer D.⁵^ORCID

Affiliation:

1. Université de Lyon; F-69000 Lyon France

2. CNRS, UMR5558; Laboratoire de Biométrie et Biologie Evolutive; Université Lyon 1; F-69622 Villeurbanne France

3. Muséum national d'Histoire naturelle; Département Ecologie et Gestion de la Biodiversité; UMR 7204-CNRS-UPMC; CP 51, 55-61 rue Buffon 75005 Paris France

4. Mathematical Ecology Research Group; Department of Zoology; University of Oxford; South Parks Road OX1 3PS Oxford UK

5. Department of Virology and Microbiology; Centro de Biología Molecular Severo Ochoa CSIC/UAM; 28049 Madrid Spain

Publisher

Wiley

Subject

Genetics,Ecology, Evolution, Behavior and Systematics,Biotechnology

Reference30 articles.

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2. Evaluation of subsampling-based normalization strategies for tagged high-throughput sequencing data sets from gut microbiomes;Aguirre de Cárcer;Applied and Environmental Microbiology,2011

3. Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing;Bokulich;Nature Methods,2013

4. Fast, accurate error-correction of amplicon pyrosequences using Acacia;Bragg;Nature Methods,2012

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